LOCUS AEC10922.1 481 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-7557
PROTEIN_ID AEC10922.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G48000"
/gene_synonym="T9J23.15"
/inference="Similar to RNA sequence,
EST:INSD:BX841232.1,INSD:AU228991.1,INSD:EG522403.1,
INSD:BP629479.1,INSD:EG522405.1,INSD:BP843005.1,
INSD:DR319932.1,INSD:BP795563.1,INSD:DR319934.1,
INSD:DR378147.1,INSD:EG518454.1,INSD:DR319933.1,
INSD:EG518455.1,INSD:BX840802.1,INSD:DR371089.1,
INSD:DR319935.1,INSD:BP599292.1,INSD:BP864964.1,
INSD:EG522407.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY128908.1,INSD:BX820783.1,INSD:AY099733.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT2G30780.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G48000"
/db_xref="TAIR:AT2G48000"
intron_pos 100:0 (1/1)
BEGIN
1 MKKRMWRISL ISQISDLLCL SRGSSSTLKT LTPFCFTLSR SPFHQSGGDD DASGLKNQLL
61 RFRNDSGKVA SVLERNKIQG AAFVELLRQL RPWPVLSQLV FDWRRNKALC DGLPMTADEY
121 AKGITISGRL KNVDLALSLF HESANKTTSV YNALMGAYLC NGLSHHCEQL FLDFNSQQDG
181 PSSSTPSVST YNILISLYGR LIMVERMESV FLQLQQLNIL PDSSTYNNLI AGYIYAWDWD
241 KMEATFHSMK NGLVKPTLAT YLLMLRGYAN SGNLLRMEDM YQAVKRHVDR NEIKLIESMI
301 CAYYRSCHKD RIRKIKTLSK LIPKKSYKPW LYLLLMQVYA KDDNLHAMEN FIDQAITKGL
361 QIETDGIMRS IVASYFRCNA VDKLAKFVQR ANSAGWKMSR SMFHGLMIMY GSQKRFKEME
421 NVLSEMESFK ISRSKKTLCI LLRVYAATHG QEHKVNQVAG MMLKHGHDFQ RPEASKRVMG
481 K
//