LOCUS AEC10917.1 442 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana trafficking protein particle complex
subunit-like protein protein.
ACCESSION CP002685-7552
PROTEIN_ID AEC10917.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47960"
/gene_synonym="F17A22.35"
/inference="Similar to RNA sequence,
EST:INSD:EG485820.1,INSD:EL173680.1,INSD:ES022172.1,
INSD:ES208719.1,INSD:ES104534.1,INSD:BP783250.1,
INSD:EL199297.1,INSD:EL004047.1,INSD:DR229260.1,
INSD:EL304211.1,INSD:DR229259.1,INSD:ES171736.1,
INSD:AA395045.1,INSD:EG485817.1,INSD:EL283017.1,
INSD:AI992973.1,INSD:DR229263.1,INSD:EG437185.1,
INSD:EL007689.1,INSD:EL274583.1,INSD:AV807566.1,
INSD:ES198570.1,INSD:DR381769.1,INSD:DR229258.1,
INSD:AV440351.1,INSD:CF651722.1,INSD:EL056310.1,
INSD:ES098597.1,INSD:EL228175.1,INSD:BE526973.1,
INSD:DR229256.1,INSD:AV810819.1,INSD:BE526966.1,
INSD:ES078796.1,INSD:AV829727.1,INSD:EG437174.1,
INSD:EL146392.1,INSD:DR229261.1,INSD:EH994835.1,
INSD:EL325196.1,INSD:AV784418.1,INSD:T43088.1,
INSD:BE530410.1,INSD:DR229264.1"
/inference="similar to RNA sequence, mRNA:INSD:BX819550.1"
/note="unknown protein; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF974 (InterPro:IPR010378);
Has 285 Blast hits to 284 proteins in 126 species: Archae
- 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32;
Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink)."
/db_xref="Araport:AT2G47960"
/db_xref="TAIR:AT2G47960"
intron_pos 97:2 (1/11)
intron_pos 126:0 (2/11)
intron_pos 169:2 (3/11)
intron_pos 204:0 (4/11)
intron_pos 209:0 (5/11)
intron_pos 255:2 (6/11)
intron_pos 325:0 (7/11)
intron_pos 350:0 (8/11)
intron_pos 389:0 (9/11)
intron_pos 404:0 (10/11)
intron_pos 437:0 (11/11)
BEGIN
1 MSATQTQTHG PHSLAFRVMR LCKPSFHVDP PLRIDPFDLL AGEDFSDDPS SASLFRRHVS
61 SADAVDSDLS YRNRFLLNHP TDPIGLSGLL LLPQSFGAIY LGETFCSYIS VNNSSTSEVR
121 DVTIKAEIQT ERQRILLLDT SKSPVESIRT GGRYDFIVEH DVKELGAHTL VCSALYNDAD
181 GERKYLPQFF KFVVANPLSV RTKVRVVKET TFLEACIENH TKANLFMDQV DFEPAKQWSA
241 VRLQNEDSTE DPPTSGLSGL IPKPPVIIRS GGGIHNYLYK LNPSADVSGQ TKFQGSNILG
301 KFQITWRTNL GEPGRLQTQQ ILGAPVSRKE INMRVVEVPA VIHLNRPFRA YLNLTNQTDR
361 QLGPFEVSLS QDETQLEKPV GINGLQTLML PRIEAFGSND FQLNLIASKL GVQKIAGITA
421 LDTREKKTYE LVPDMEIFVE TD
//