LOCUS AEC10914.1 607 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEGP protease 2 protein.
ACCESSION CP002685-7549
PROTEIN_ID AEC10914.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DEG2"
/locus_tag="AT2G47940"
/gene_synonym="DEGP protease 2"
/gene_synonym="DEGP2"
/gene_synonym="degradation of periplasmic proteins 2"
/gene_synonym="EMB3117"
/gene_synonym="EMBRYO DEFECTIVE 3117"
/inference="Similar to RNA sequence,
EST:INSD:AV799492.1,INSD:AV782396.1,INSD:EL326963.1,
INSD:ES078317.1,INSD:BP779939.1,INSD:AA651420.1,
INSD:ES187202.1,INSD:AV792672.1,INSD:AV821099.1,
INSD:EL174625.1,INSD:EL314773.1,INSD:EH848407.1,
INSD:EH861455.1,INSD:T45543.1,INSD:EL258317.1,
INSD:EH846203.1,INSD:BP850805.1,INSD:AV810848.1,
INSD:EH809740.1,INSD:ES132118.1,INSD:BP651014.1,
INSD:BP788488.1,INSD:CB258834.1,INSD:EH946618.1,
INSD:EG490328.1,INSD:EH856256.1,INSD:F14056.1,
INSD:EL127370.1,INSD:BE528928.1,INSD:EH863784.1,
INSD:AV781349.1,INSD:BX840379.1,INSD:AV440084.1,
INSD:ES007396.1,INSD:EH931873.1,INSD:AV527549.1,
INSD:AV799646.1,INSD:AA395366.1,INSD:BP655809.1,
INSD:EH856720.1,INSD:EL021742.1,INSD:EL097545.1,
INSD:ES049231.1,INSD:EL308062.1,INSD:BP667443.1,
INSD:EH846298.1,INSD:EL280577.1,INSD:BP812330.1,
INSD:AV547931.1,INSD:EH795299.1,INSD:EL081809.1,
INSD:EL269689.1,INSD:BX836307.1,INSD:AA605461.1,
INSD:EH949348.1,INSD:BP659903.1,INSD:EL258310.1,
INSD:ES189078.1,INSD:BP820316.1,INSD:EL152703.1,
INSD:AV532549.1,INSD:EL138846.1,INSD:BX840499.1,
INSD:AV518667.1,INSD:BP779269.1,INSD:EL011664.1,
INSD:EH911472.1,INSD:BP657035.1,INSD:AV796929.1,
INSD:AV800490.1,INSD:EL310647.1,INSD:EH859057.1,
INSD:ES142008.1,INSD:AV520981.1,INSD:AV802941.1,
INSD:AV542677.1,INSD:BX836391.1,INSD:EH891318.1,
INSD:EH857258.1,INSD:BP648342.1,INSD:BP795808.1,
INSD:BP831005.1,INSD:BP794186.1,INSD:AV806273.1,
INSD:EL113717.1,INSD:AV820498.1,INSD:BP639622.1,
INSD:EL074856.1,INSD:F13993.1,INSD:BP794636.1,
INSD:EH905403.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY075700.1,INSD:AF349516.1,INSD:AF245171.1,
INSD:AF326865.1,INSD:AY102139.1"
/note="DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type
peptidase activity, serine-type endopeptidase activity;
INVOLVED IN: photosystem II repair, proteolysis; LOCATED
IN: chloroplast stromal thylakoid, chloroplast thylakoid
membrane, chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase,
trypsin-like (InterPro:IPR009003), Serine endopeptidase
DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S
(InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap
(InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478);
BEST Arabidopsis thaliana protein match is: DegP protease
9 (TAIR:AT5G40200.1); Has 15046 Blast hits to 15035
proteins in 2533 species: Archae - 101; Bacteria - 10614;
Metazoa - 317; Fungi - 14; Plants - 376; Viruses - 0;
Other Eukaryotes - 3624 (source: NCBI BLink)."
/db_xref="Araport:AT2G47940"
/db_xref="TAIR:AT2G47940"
intron_pos 62:0 (1/18)
intron_pos 104:0 (2/18)
intron_pos 121:0 (3/18)
intron_pos 145:2 (4/18)
intron_pos 167:0 (5/18)
intron_pos 182:0 (6/18)
intron_pos 218:0 (7/18)
intron_pos 244:0 (8/18)
intron_pos 266:1 (9/18)
intron_pos 286:0 (10/18)
intron_pos 319:1 (11/18)
intron_pos 346:0 (12/18)
intron_pos 365:0 (13/18)
intron_pos 399:2 (14/18)
intron_pos 429:0 (15/18)
intron_pos 457:2 (16/18)
intron_pos 466:0 (17/18)
intron_pos 490:0 (18/18)
BEGIN
1 MAASVANCCF SVLNASVKIQ SSSISSPWCF VSASSLTPRA SSNIKRKSSR SDSPSPILNP
61 EKNYPGRVRD ESSNPPQKMA FKAFGSPKKE KKESLSDFSR DQQTDPAKIH DASFLNAVVK
121 VYCTHTAPDY SLPWQKQRQF TSTGSAFMIG DGKLLTNAHC VEHDTQVKVK RRGDDRKYVA
181 KVLVRGVDCD IALLSVESED FWKGAEPLRL GHLPRLQDSV TVVGYPLGGD TISVTKGVVS
241 RIEVTSYAHG SSDLLGIQID AAINPGNSGG PAFNDQGECI GVAFQVYRSE ETENIGYVIP
301 TTVVSHFLTD YERNGKYTGY PCLGVLLQKL ENPALRECLK VPTNEGVLVR RVEPTSDASK
361 VLKEGDVIVS FDDLHVGCEG TVPFRSSERI AFRYLISQKF AGDIAEIGII RAGEHKKVQV
421 VLRPRVHLVP YHIDGGQPSY IIVAGLVFTP LSEPLIEEEC EDTIGLKLLT KARYSVARFR
481 GEQIVILSQV LANEVNIGYE DMNNQQVLKF NGIPIRNIHH LAHLIDMCKD KYLVFEFEDN
541 YVAVLEREAS NSASLCILKD YGIPSERSAD LLEPYVDPID DTQALDQGIG DSPVSNLEIG
601 FDGLVWA
//