LOCUS AEC10907.1 406 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tubby like protein 3 protein.
ACCESSION CP002685-7539
PROTEIN_ID AEC10907.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TLP3"
/locus_tag="AT2G47900"
/gene_synonym="AtTLP3"
/gene_synonym="F17A22.29"
/gene_synonym="tubby like protein 3"
/inference="Similar to RNA sequence,
EST:INSD:EH992615.1,INSD:BP611092.1,INSD:ES088310.1,
INSD:EL025807.1,INSD:EL330567.1,INSD:EL335586.1,
INSD:EL211060.1,INSD:EL125572.1,INSD:AU230107.1,
INSD:BP663707.1,INSD:BP669020.1,INSD:EH854648.1,
INSD:EL211556.1,INSD:EH982621.1,INSD:BP861281.1,
INSD:ES047788.1,INSD:CB258017.1,INSD:AV816082.1,
INSD:EL008347.1,INSD:BP811389.1,INSD:EH808505.1,
INSD:EL229090.1,INSD:EH832223.1,INSD:AV440927.1,
INSD:ES045250.1,INSD:ES149962.1,INSD:BP619065.1,
INSD:EL161108.1,INSD:EL058984.1,INSD:EL037595.1,
INSD:EL289909.1,INSD:AU238861.1,INSD:EL156898.1,
INSD:ES132227.1,INSD:AI998214.1,INSD:ES057666.1,
INSD:AV547240.1,INSD:ES061349.1,INSD:AV816874.1,
INSD:EL198792.1,INSD:EL003319.1,INSD:EH873308.1,
INSD:EH928588.1,INSD:AV831449.1,INSD:EH840561.1,
INSD:ES179089.1,INSD:Z46570.1,INSD:EL050690.1,
INSD:AV442596.1,INSD:EL082435.1,INSD:EH962253.1,
INSD:Z46569.1,INSD:DR368310.1,INSD:ES103704.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY096604.1,INSD:AY074273.1,INSD:AY045774.1"
/note="tubby like protein 3 (TLP3); CONTAINS InterPro
DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810),
Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis
thaliana protein match is: tubby like protein 5
(TAIR:AT1G43640.1); Has 958 Blast hits to 953 proteins in
118 species: Archae - 0; Bacteria - 0; Metazoa - 352;
Fungi - 19; Plants - 470; Viruses - 0; Other Eukaryotes -
117 (source: NCBI BLink)."
/db_xref="Araport:AT2G47900"
/db_xref="TAIR:AT2G47900"
intron_pos 116:0 (1/4)
intron_pos 145:1 (2/4)
intron_pos 189:2 (3/4)
intron_pos 249:2 (4/4)
BEGIN
1 MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL
61 RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV PELSSKLTFP ISLKQPGPRG
121 SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG
181 SNTYIGKLRS NFLGTKFTVY DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS
241 YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301 SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG
361 PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD TKIACE
//