LOCUS AEC10901.1 517 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002685-7532
PROTEIN_ID AEC10901.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SETH6"
/locus_tag="AT2G47860"
/gene_synonym="F17A22.25"
/inference="Similar to RNA sequence,
EST:INSD:BP607977.1,INSD:AV529221.1,INSD:EG489814.1,
INSD:EG489803.1,INSD:EG482780.1,INSD:CB255366.1,
INSD:BX834931.1,INSD:BX838119.1,INSD:BX834915.1,
INSD:EG482779.1,INSD:AV523531.1"
/note="Phototropic-responsive NPH3 family protein;
FUNCTIONS IN: signal transducer activity; INVOLVED IN:
response to light stimulus; LOCATED IN: plasma membrane;
EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST
Arabidopsis thaliana protein match is:
Phototropic-responsive NPH3 family protein
(TAIR:AT1G03010.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G47860"
/db_xref="TAIR:AT2G47860"
intron_pos 326:0 (1/1)
BEGIN
1 MTEDLSEKNL EARTEAYLKD SIFNDISNSI TVLHSCERLL PVAEEINLVG RLVNAIAVNA
61 CKEQLASGLL KLDQSFSCGV PETAKPCDWW GRSLPILKLD FFQRVLSAMK SKGLNHDIIS
121 DILMSYARKS LQIIREPNLV KSDSDLQRKQ RIVLEAVVGL LPTQANKSSI PISFLSSLLK
181 TAIGSGTSVS CRSDLERRIS HLLDQAILED ILIPANIGAM YDTDSVQRIF SMFLNLDECE
241 YRDDDDDEED AVDESEMAMY DFEGAESPKQ SSIFKVSKLM DSYLAEVALD SSLPPSKFIA
301 LAELLPDHAR VVCDGLYRAV DIFLKVHPHM KDSERYRLCK TVSCKKLSQD ASSHAAQNER
361 LPVQIAVQVL FYEQTRLKNA MTSGGGTGGS NQSQFFLFPN RSGSGMASGA ISPRDNYASV
421 RRENRELRLE VARMRMRLTD LEKDHVSMKR DFVKPQSRRR RYGMLRKLSR GLNKLNAIVL
481 RFRSSQSVAS SGKKHTEEKT NSERRFMFQK RRCHSVS
//