LOCUS AEC10900.1 635 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002685-7528
PROTEIN_ID AEC10900.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SETH6"
/locus_tag="AT2G47860"
/gene_synonym="F17A22.25"
/inference="Similar to RNA sequence,
EST:INSD:BP607977.1,INSD:AV529221.1,INSD:EG489814.1,
INSD:EG489803.1,INSD:EG482780.1,INSD:CB255366.1,
INSD:BX834931.1,INSD:BX834915.1,INSD:EG482779.1,
INSD:BX838099.1"
/note="Phototropic-responsive NPH3 family protein;
FUNCTIONS IN: signal transducer activity; INVOLVED IN:
response to light stimulus; LOCATED IN: plasma membrane;
EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold
(InterPro:IPR011333); BEST Arabidopsis thaliana protein
match is: Phototropic-responsive NPH3 family protein
(TAIR:AT1G03010.1); Has 884 Blast hits to 856 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi -
0; Plants - 876; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink)."
/db_xref="Araport:AT2G47860"
/db_xref="TAIR:AT2G47860"
intron_pos 32:2 (1/3)
intron_pos 55:0 (2/3)
intron_pos 444:0 (3/3)
BEGIN
1 MGVVTVPESN KQSVAAKRAF RPSSSIRHTP QWPVSDVTSD LTIEVGSATF SLHKFPLVSR
61 SGRIRKLVLE SKDTNLNLAA VPGGSESFEL AAKFCYGVGV QYNSSNIAAL RCVAHYLEMT
121 EDLSEKNLEA RTEAYLKDSI FNDISNSITV LHSCERLLPV AEEINLVGRL VNAIAVNACK
181 EQLASGLLKL DQSFSCGVPE TAKPCDWWGR SLPILKLDFF QRVLSAMKSK GLNHDIISDI
241 LMSYARKSLQ IIREPNLVKS DSDLQRKQRI VLEAVVGLLP TQANKSSIPI SFLSSLLKTA
301 IGSGTSVSCR SDLERRISHL LDQAILEDIL IPANIGAMYD TDSVQRIFSM FLNLDECEYR
361 DDDDDEEDAV DESEMAMYDF EGAESPKQSS IFKVSKLMDS YLAEVALDSS LPPSKFIALA
421 ELLPDHARVV CDGLYRAVDI FLKVHPHMKD SERYRLCKTV SCKKLSQDAS SHAAQNERLP
481 VQIAVQVLFY EQTRLKNAMT SGGGTGGSNQ SQFFLFPNRS GSGMASGAIS PRDNYASVRR
541 ENRELRLEVA RMRMRLTDLE KDHVSMKRDF VKPQSRRRRY GMLRKLSRGL NKLNAIVLRF
601 RSSQSVASSG KKHTEEKTNS ERRFMFQKRR CHSVS
//