LOCUS AEC10886.1 196 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TSPO(outer membrane tryptophan-rich
sensory protein)-like protein protein.
ACCESSION CP002685-7512
PROTEIN_ID AEC10886.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TSPO"
/locus_tag="AT2G47770"
/gene_synonym="ATTSPO"
/gene_synonym="F17A22.16"
/gene_synonym="TSPO(outer membrane tryptophan-rich sensory
protein)-related"
/inference="Similar to RNA sequence,
EST:INSD:BP825907.1,INSD:BP819985.1,INSD:BP819626.1,
INSD:BP655699.1,INSD:BP656629.1,INSD:AV784330.1,
INSD:T44314.1,INSD:BP647295.1,INSD:AV823376.1,
INSD:BP562577.2,INSD:BP642040.1,INSD:BP829336.1,
INSD:EL222297.1,INSD:CD529043.1,INSD:BE039018.1,
INSD:CB256370.1,INSD:BP644640.1,INSD:AA394461.1,
INSD:T46551.1,INSD:CD533097.1,INSD:CD530760.1,
INSD:BP824601.1,INSD:BP655342.1,INSD:BP657749.1,
INSD:AV811494.1,INSD:AA395419.1,INSD:BP591533.1,
INSD:AV830372.1,INSD:BP618936.1,INSD:CD532418.1,
INSD:EG512952.1,INSD:BP613601.1,INSD:BE528595.1,
INSD:EG495951.1,INSD:CD529170.1,INSD:BP832653.1,
INSD:BP657017.1,INSD:AI994973.1,INSD:EG512950.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY079391.1,INSD:AY045981.1,INSD:BX821252.1,
INSD:AF428356.1"
/note="TSPO(outer membrane tryptophan-rich sensory
protein)-related (TSPO); CONTAINS InterPro DOMAIN/s:
TspO/MBR-related protein (InterPro:IPR004307); Has 567
Blast hits to 567 proteins in 188 species: Archae - 24;
Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53;
Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink)."
/db_xref="Araport:AT2G47770"
/db_xref="TAIR:AT2G47770"
BEGIN
1 MDSQDIRYRG GDDRDAATTA MAETERKSAD DNKGKRDQKR AMAKRGLKSL TVAVAAPVLV
61 TLFATYFLGT SDGYGNRAKS SSWIPPLWLL HTTCLASSGL MGLAAWLVWV DGGFHKKPNA
121 LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL
181 AWAAFVAAVN VKLAVA
//