LOCUS AEC10853.1 492 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana fumarase 1 protein.
ACCESSION CP002685-7473
PROTEIN_ID AEC10853.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="FUM1"
/locus_tag="AT2G47510"
/gene_synonym="fumarase 1"
/gene_synonym="T30B22.19"
/inference="Similar to RNA sequence,
EST:INSD:AV792238.1,INSD:ES173995.1,INSD:EH987530.1,
INSD:BP581177.1,INSD:ES060710.1,INSD:AV808263.1,
INSD:EG522843.1,INSD:EH931472.1,INSD:AV799485.1,
INSD:ES098947.1,INSD:EL277737.1,INSD:DR251553.1,
INSD:ES057729.1,INSD:ES208829.1,INSD:BP777188.1,
INSD:ES053232.1,INSD:EH819302.1,INSD:BP591886.1,
INSD:Z33930.1,INSD:BP661353.1,INSD:EL307875.1,
INSD:EH832728.1,INSD:EH979536.1,INSD:DR251552.1,
INSD:AV795320.1,INSD:ES149444.1,INSD:ES171603.1,
INSD:T21883.1,INSD:DR251551.1,INSD:EH878194.1,
INSD:ES031391.1,INSD:EL108128.1,INSD:ES137736.1,
INSD:EL085426.1,INSD:ES033384.1,INSD:EG480531.1,
INSD:BP646001.1,INSD:EG521621.1,INSD:BP646293.1,
INSD:EL171116.1,INSD:ES073066.1,INSD:EL988231.1,
INSD:EH854787.1,INSD:BP668420.1,INSD:EH872001.1,
INSD:EL038940.1"
/inference="similar to RNA sequence, mRNA:INSD:BT003361.1"
/note="fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase
activity, protein binding; INVOLVED IN: response to
oxidative stress, response to salt stress, pollen tube
development; LOCATED IN: mitochondrion; EXPRESSED IN:
cotyledon, male gametophyte, guard cell, root; EXPRESSED
DURING: seed development stages; CONTAINS InterPro
DOMAIN/s: Fumarate hydratase, class II
(InterPro:IPR005677), L-Aspartase-like
(InterPro:IPR008948), Fumarate lyase, conserved site
(InterPro:IPR020557), Lyase 1, N-terminal
(InterPro:IPR022761), Fumarase C, C-terminal
(InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362);
BEST Arabidopsis thaliana protein match is: FUMARASE 2
(TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins
in 2822 species: Archae - 389; Bacteria - 12991; Metazoa -
306; Fungi - 295; Plants - 106; Viruses - 0; Other
Eukaryotes - 5649 (source: NCBI BLink)."
/db_xref="Araport:AT2G47510"
/db_xref="TAIR:AT2G47510"
intron_pos 48:2 (1/16)
intron_pos 88:0 (2/16)
intron_pos 138:0 (3/16)
intron_pos 175:0 (4/16)
intron_pos 203:0 (5/16)
intron_pos 236:0 (6/16)
intron_pos 253:0 (7/16)
intron_pos 269:2 (8/16)
intron_pos 297:0 (9/16)
intron_pos 328:2 (10/16)
intron_pos 351:0 (11/16)
intron_pos 368:0 (12/16)
intron_pos 400:0 (13/16)
intron_pos 433:0 (14/16)
intron_pos 443:0 (15/16)
intron_pos 465:0 (16/16)
BEGIN
1 MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN
61 FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK AIMQAAQEVA EGKLNDHFPL
121 VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA
181 ATEINSRLIP SLKTLHSTLE SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL
241 NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301 ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA
361 LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS VRLIADASAS FEKNCVRGIE
421 ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT
481 LVVPEKMIGP SD
//