LOCUS AEC10839.1 353 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal RNA adenine dimethylase
family protein protein.
ACCESSION CP002685-7456
PROTEIN_ID AEC10839.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DIM1A"
/locus_tag="AT2G47420"
/gene_synonym="adenosine dimethyl transferase 1A"
/gene_synonym="T30B22.28"
/inference="Similar to RNA sequence,
EST:INSD:EL234836.1,INSD:BP641270.1,INSD:EL281725.1,
INSD:EH810472.1,INSD:EH845136.1,INSD:ES081257.1,
INSD:BP832486.1,INSD:EH863497.1,INSD:EL091337.1,
INSD:EL325624.1,INSD:ES160687.1,INSD:BP631080.1,
INSD:EH870674.1,INSD:ES016915.1,INSD:BP667958.1,
INSD:ES147357.1,INSD:EL303642.1,INSD:BP573350.1,
INSD:EL111044.1,INSD:BP780637.1,INSD:BP786849.1,
INSD:EH899769.1,INSD:BE524637.1,INSD:EL221683.1,
INSD:DR358049.1,INSD:EL331652.1,INSD:BP808782.1,
INSD:BP643946.1,INSD:EL234444.1,INSD:EH868715.1,
INSD:EL008390.1,INSD:DR358053.1,INSD:EH831986.1,
INSD:AI995707.1,INSD:AV537462.1,INSD:EL184033.1,
INSD:EL282335.1,INSD:EL018318.1,INSD:ES158317.1,
INSD:EH884064.1,INSD:EL245634.1,INSD:EH799911.1,
INSD:EH806682.1,INSD:BP856356.1,INSD:AV820923.1,
INSD:AV439868.1,INSD:EH810397.1,INSD:BP852247.1,
INSD:BP626571.1,INSD:EL309485.1,INSD:ES065659.1,
INSD:BE037583.1,INSD:AV561327.1,INSD:EL278277.1,
INSD:BP868514.1,INSD:AV565305.1,INSD:EL308638.1,
INSD:EH837624.1,INSD:DR358052.1,INSD:EL092089.1,
INSD:EH910554.1,INSD:BE522711.1,INSD:DR382858.1,
INSD:Z32608.1,INSD:EH883829.1,INSD:EL153610.1,
INSD:ES064298.1,INSD:AV781970.1,INSD:BP594741.1,
INSD:BP624157.1,INSD:EL231280.1,INSD:EL190234.1,
INSD:ES206883.1,INSD:EL199912.1,INSD:BP646403.1,
INSD:EH800761.1,INSD:BE522712.1,INSD:ES211481.1,
INSD:BP595984.1,INSD:ES185288.1,INSD:DR358050.1,
INSD:ES055976.1,INSD:BP784286.1,INSD:EL192891.1,
INSD:DR358051.1,INSD:AV441693.1,INSD:ES098104.1,
INSD:EH990250.1,INSD:ES137300.1,INSD:EL034727.1,
INSD:AV549346.1,INSD:EL102066.1,INSD:ES202158.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY113864.1,INSD:AY039949.1,INSD:BX820679.1,
INSD:BX821862.1"
/note="Ribosomal RNA adenine dimethylase family protein;
FUNCTIONS IN: rRNA methyltransferase activity, rRNA
(adenine-N6,N6-)-dimethyltransferase activity, rRNA
(adenine) methyltransferase activity; INVOLVED IN: rRNA
modification, rRNA processing; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal RNA adenine methylase
transferase, N-terminal (InterPro:IPR020598), Ribosomal
RNA adenine dimethylase (InterPro:IPR011530), Ribosomal
RNA adenine methylase transferase, conserved site
(InterPro:IPR020596), Ribosomal RNA adenine methylase
transferase (InterPro:IPR001737); BEST Arabidopsis
thaliana protein match is: Ribosomal RNA adenine
dimethylase family protein (TAIR:AT5G66360.2); Has 9871
Blast hits to 9860 proteins in 3038 species: Archae - 214;
Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120;
Viruses - 0; Other Eukaryotes - 2601 (source: NCBI
BLink)."
/db_xref="Araport:AT2G47420"
/db_xref="TAIR:AT2G47420"
intron_pos 107:0 (1/1)
BEGIN
1 MAGGKIRKEK PKASNRAPSN HYQGGISFHK SKGQHILKNP LLVDSIVQKA GIKSTDVILE
61 IGPGTGNLTK KLLEAGKEVI AVELDSRMVL ELQRRFQGTP FSNRLKVIQG DVLKTELPRF
121 DICVANIPYQ ISSPLTFKLL FHPTSFRCAV IMYQREFAMR LVAQPGDNLY CRLSVNTQLY
181 ARVSHLLKVG KNNFRPPPKV DSSVVRIEPR RPGPQVNKKE WDGFLRVCFI RKNKTLGSIF
241 KQKSVLSMLE KNFKTLQAVL ASLQNNGEPA LNTTSMDLGD QSMGMEDDDN EMDDDDMEMD
301 EGEGDGGETS EFKEKVMNVL KEGGFEEKRS SKLSQQEFLY LLSLFNKSGI HFT
//