LOCUS AEC10838.1 1519 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana WD40 domain-containing protein protein.
ACCESSION CP002685-7452
PROTEIN_ID AEC10838.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47410"
/gene_synonym="T30B22.2"
/note="WD40/YVTN repeat-like-containing
domain;Bromodomain; FUNCTIONS IN: nucleotide binding;
LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), WD40 repeat (InterPro:IPR001680),
Bromodomain (InterPro:IPR001487), G-protein beta WD-40
repeat, region (InterPro:IPR020472), WD40
repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: WD40/YVTN repeat-like-containing
domain;Bromodomain (TAIR:AT5G49430.1)."
/db_xref="Araport:AT2G47410"
/db_xref="TAIR:AT2G47410"
intron_pos 110:2 (1/23)
intron_pos 162:1 (2/23)
intron_pos 241:1 (3/23)
intron_pos 278:0 (4/23)
intron_pos 304:0 (5/23)
intron_pos 339:2 (6/23)
intron_pos 371:1 (7/23)
intron_pos 405:0 (8/23)
intron_pos 439:2 (9/23)
intron_pos 465:2 (10/23)
intron_pos 492:0 (11/23)
intron_pos 548:1 (12/23)
intron_pos 572:0 (13/23)
intron_pos 599:0 (14/23)
intron_pos 622:2 (15/23)
intron_pos 655:0 (16/23)
intron_pos 675:0 (17/23)
intron_pos 693:1 (18/23)
intron_pos 824:0 (19/23)
intron_pos 1054:2 (20/23)
intron_pos 1245:0 (21/23)
intron_pos 1435:0 (22/23)
intron_pos 1454:2 (23/23)
BEGIN
1 MDWIHKSTPF MEPSNLAKLV QGNVPLQPHD SHSSLTDLDM DLREVYFLIL HFLSIGPCER
61 TFGHLRDEIL EKGLLPRRYH SWWSRSGIYS GRADDDGISL PLSYDNLIER YPHIEKDHLV
121 KLLKQLILNP SFPSHMRVEG NAPNAADVPT LLGSGTFSLV DRNNIESQKA RHVASYLRWP
181 HMHADQVRGL SLREIGGGFR KHHRAPSILS ACHAIAKPST MVQKMQNIKK LRGHRNAVYC
241 AIFDRSGRYV ITGSDDRLVK IWSMETALCL ASCRGHEGDI TDLAVSSNNA LVASASNDFV
301 IRVWRLPDGM PISVLRGHTG AVTAIAFSPR QASVYQLLSS SDDGTCRIWD ARYSQWLPRI
361 YVPSPSDANT GSTSNASQSH QILCCAYNAN GTIFVTGSSD SNARVWSASK PNLDDAEQPT
421 HELDVLRGHE NDVNYVQFSG CAVAPKSSTA DALKEDSYPK FKNSWFCHDN IVTCSRDGSA
481 IIWTPRSRKF HGKSGRWMKG YHLKVPPPPL PPQPPRGGPR QRFLPTPRGV NMIIWSLDNR
541 FVLAAIMDCR ICVWNAADGS LVHCLTGHSE SSYVLDVHPF NPRIAMSAGY DGKTIIWDIW
601 EGIPIKVYEI GRFKLVDGKF SQDGTSIVLS DDVGQIYFLN TGQGESQKNA KYDQFFLGDY
661 RPLIRDTNGH VLDQETQLLP HRRNLQDLLC DSSMIPYPEP DQTMFQQRRL GALGVEWRPS
721 SIKFSVGPDF SLGQDYIMPP LADLDRLIEP LPEFIDAMYW EPEHEVLSDD NDSEYNAEVS
781 SDGARASPCS NSSNELECSS EDSDVENIHE SSYHWKRRRK HPKVNVSTSS GRRDKRILDE
841 NDSSNSGIKR TKNRRIVVKA SKRKHSDVKA SRPQRAAAQN ARSLLSKISG SSSDEVDDDN
901 DSSNSESDRS IPTLRQLDKP SQMLESLSND KQKKRLIVKI SVKKPAESMG SKGDVINQAD
961 LEQLSSKPLE ENHRVIGIYS REPGSSSVDA KGDSGCQSIP YSMNTPQREK ADNQLIRSSD
1021 QDQNMCKWRE EIPVCEPTEL TAPENIEEAQ PFYGDEADEI LPKKVRRLRL KLRHPNSPRK
1081 LEPDEVADDL ADGGDGFASI APSFMNPIMD SEPVIDSVRD SSAHNFEFGE ATADVIRRKR
1141 SIRSESSTRN SALRIRLGSG SVDKIKKQGI PSTSVYDDAS LEEWPSTSKA GSRSRSASVS
1201 KPSLHTGIRL NSVSGKISWL LLSEHEEGCR YIPQLGDEVI YFKQGHQEFL KTKELNDRDR
1261 SRYLPRNLGA VEICKVEKLN YDTYPGSGDS CCKMTLRVLD SSSSHASRKE FQLTLPELIN
1321 FPDFIVEKTR YDAAIQTNWK IGNECRVWWR DATGEGGAWW EGRIESSQVK STDFPESPWE
1381 RYRVVYETGE TSLHSPWEFD NPEFPWEKST IEDERREKLL SLFAGLVKSI SKHQDSYGIQ
1441 KLNEAAQKMD FCNRFPVPLY PELIHERLEN QYYRSIESFK HDVDAMLSNA ELYFVRSAHM
1501 LSKIKRLRDK LTKTLRKLI
//