LOCUS AEC10837.1 1520 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana WD40 domain-containing protein protein.
ACCESSION CP002685-7451
PROTEIN_ID AEC10837.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47410"
/gene_synonym="T30B22.2"
/inference="Similar to RNA sequence,
EST:INSD:AV832167.1,INSD:EH942088.1,INSD:ES069476.1,
INSD:ES165488.1,INSD:EL970406.1,INSD:CB252159.1,
INSD:EL993693.1,INSD:EL134219.1,INSD:EL018345.1,
INSD:EL287621.1,INSD:EL066684.1,INSD:AV819426.1,
INSD:ES146311.1,INSD:EH967649.1"
/inference="similar to RNA sequence, mRNA:INSD:AY128365.1"
/note="WD40/YVTN repeat-like-containing
domain;Bromodomain; CONTAINS InterPro DOMAIN/s: WD40
repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), WD40 repeat (InterPro:IPR001680),
Bromodomain (InterPro:IPR001487), G-protein beta WD-40
repeat, region (InterPro:IPR020472), WD40
repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: WD40/YVTN repeat-like-containing
domain;Bromodomain (TAIR:AT5G49430.1); Has 67123 Blast
hits to 29366 proteins in 847 species: Archae - 50;
Bacteria - 8348; Metazoa - 26818; Fungi - 14890; Plants -
8157; Viruses - 8; Other Eukaryotes - 8852 (source: NCBI
BLink)."
/db_xref="Araport:AT2G47410"
/db_xref="TAIR:AT2G47410"
intron_pos 110:2 (1/23)
intron_pos 163:1 (2/23)
intron_pos 242:1 (3/23)
intron_pos 279:0 (4/23)
intron_pos 305:0 (5/23)
intron_pos 340:2 (6/23)
intron_pos 372:1 (7/23)
intron_pos 406:0 (8/23)
intron_pos 440:2 (9/23)
intron_pos 466:2 (10/23)
intron_pos 493:0 (11/23)
intron_pos 549:1 (12/23)
intron_pos 573:0 (13/23)
intron_pos 600:0 (14/23)
intron_pos 623:2 (15/23)
intron_pos 656:0 (16/23)
intron_pos 676:0 (17/23)
intron_pos 694:1 (18/23)
intron_pos 825:0 (19/23)
intron_pos 1055:2 (20/23)
intron_pos 1246:0 (21/23)
intron_pos 1436:0 (22/23)
intron_pos 1455:2 (23/23)
BEGIN
1 MDWIHKSTPF MEPSNLAKLV QGNVPLQPHD SHSSLTDLDM DLREVYFLIL HFLSIGPCER
61 TFGHLRDEIL EKGLLPRRYH SWWSRSGIYS GRADDDGISL PLSYDNLIER YPHIEKDHLV
121 KLLKQLILNP SFPSHMRVEG NAPNAADVPT LLGSGTFSLV DRSNNIESQK ARHVASYLRW
181 PHMHADQVRG LSLREIGGGF RKHHRAPSIL SACHAIAKPS TMVQKMQNIK KLRGHRNAVY
241 CAIFDRSGRY VITGSDDRLV KIWSMETALC LASCRGHEGD ITDLAVSSNN ALVASASNDF
301 VIRVWRLPDG MPISVLRGHT GAVTAIAFSP RQASVYQLLS SSDDGTCRIW DARYSQWLPR
361 IYVPSPSDAN TGSTSNASQS HQILCCAYNA NGTIFVTGSS DSNARVWSAS KPNLDDAEQP
421 THELDVLRGH ENDVNYVQFS GCAVAPKSST ADALKEDSYP KFKNSWFCHD NIVTCSRDGS
481 AIIWTPRSRK FHGKSGRWMK GYHLKVPPPP LPPQPPRGGP RQRFLPTPRG VNMIIWSLDN
541 RFVLAAIMDC RICVWNAADG SLVHCLTGHS ESSYVLDVHP FNPRIAMSAG YDGKTIIWDI
601 WEGIPIKVYE IGRFKLVDGK FSQDGTSIVL SDDVGQIYFL NTGQGESQKN AKYDQFFLGD
661 YRPLIRDTNG HVLDQETQLL PHRRNLQDLL CDSSMIPYPE PDQTMFQQRR LGALGVEWRP
721 SSIKFSVGPD FSLGQDYIMP PLADLDRLIE PLPEFIDAMY WEPEHEVLSD DNDSEYNAEV
781 SSDGARASPC SNSSNELECS SEDSDVENIH ESSYHWKRRR KHPKVNVSTS SGRRDKRILD
841 ENDSSNSGIK RTKNRRIVVK ASKRKHSDVK ASRPQRAAAQ NARSLLSKIS GSSSDEVDDD
901 NDSSNSESDR SIPTLRQLDK PSQMLESLSN DKQKKRLIVK ISVKKPAESM GSKGDVINQA
961 DLEQLSSKPL EENHRVIGIY SREPGSSSVD AKGDSGCQSI PYSMNTPQRE KADNQLIRSS
1021 DQDQNMCKWR EEIPVCEPTE LTAPENIEEA QPFYGDEADE ILPKKVRRLR LKLRHPNSPR
1081 KLEPDEVADD LADGGDGFAS IAPSFMNPIM DSEPVIDSVR DSSAHNFEFG EATADVIRRK
1141 RSIRSESSTR NSALRIRLGS GSVDKIKKQG IPSTSVYDDA SLEEWPSTSK AGSRSRSASV
1201 SKPSLHTGIR LNSVSGKISW LLLSEHEEGC RYIPQLGDEV IYFKQGHQEF LKTKELNDRD
1261 RSRYLPRNLG AVEICKVEKL NYDTYPGSGD SCCKMTLRVL DSSSSHASRK EFQLTLPELI
1321 NFPDFIVEKT RYDAAIQTNW KIGNECRVWW RDATGEGGAW WEGRIESSQV KSTDFPESPW
1381 ERYRVVYETG ETSLHSPWEF DNPEFPWEKS TIEDERREKL LSLFAGLVKS ISKHQDSYGI
1441 QKLNEAAQKM DFCNRFPVPL YPELIHERLE NQYYRSIESF KHDVDAMLSN AELYFVRSAH
1501 MLSKIKRLRD KLTKTLRKLI
//