LOCUS AEC10830.1 486 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana HIT zinc finger and PAPA-1-like domain-
containing protein protein.
ACCESSION CP002685-7441
PROTEIN_ID AEC10830.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47350"
/gene_synonym="T8I13.19"
/inference="Similar to RNA sequence,
EST:INSD:BE526926.1,INSD:ES087883.1,INSD:DR365016.1,
INSD:ES075701.1,INSD:ES069550.1,INSD:BX838033.1,
INSD:CB264231.1,INSD:EH845477.1,INSD:EL250020.1,
INSD:EL161502.1,INSD:AU237717.1,INSD:BX834827.1,
INSD:AU228804.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT030470.1,INSD:AK229228.1,INSD:BX818866.1"
/note="HIT zinc finger; PAPA-1-like conserved region;
CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type
(InterPro:IPR007529), PAPA-1-like conserved region
(InterPro:IPR006880); BEST Arabidopsis thaliana protein
match is: PAPA-1-like family protein / zinc finger (HIT
type) family protein (TAIR:AT3G06660.1); Has 3160 Blast
hits to 2461 proteins in 330 species: Archae - 7; Bacteria
- 184; Metazoa - 1235; Fungi - 390; Plants - 202; Viruses
- 26; Other Eukaryotes - 1116 (source: NCBI BLink)."
/db_xref="Araport:AT2G47350"
/db_xref="TAIR:AT2G47350"
intron_pos 171:0 (1/5)
intron_pos 336:1 (2/5)
intron_pos 370:0 (3/5)
intron_pos 400:0 (4/5)
intron_pos 441:2 (5/5)
BEGIN
1 MEDNGVAYCD GMTNTVRKKR SLTCRRPRPE GSSVLTSSDR FSKISSDDIP AFDTNPRRKE
61 FSLSHCISRA ESIAESERGN NDFRRREIIN RNKRSTEGVL APASSKYPSR EVEGNGMING
121 KGTDSGELEG ETKRMKLKIG GVSRLVHANG SSRKSSKPVT DTIRSNHDLQ ESSEDCNSPL
181 DKKADLEGVT WDAEIDGSMT GRRKQEEPSG LVRKSKRAPK KRVFDSDDDS DDEIRYLEKL
241 KYKRVSVCNE DTESGRKQLT PSGITNGENS GKKKAVSEQA SEDMDCAEEI ETASDEKEIG
301 NDNKRESTMT SRQRALASGR SSAIDFSDGL PPTSRRKKET LSEMEQQLKK AEAAQRRKVQ
361 IEKAARESEE GAIKKILGQD SSRKKRGDKI KKRLDDLAQE KAAQEERAST CCIRTIMGPN
421 GTTVSFPIDK VPSLFDPKPS GYPPPRENCV GPSCTNPYKY RDSKTKVPLC SLKCYKAVQG
481 QQIAPP
//