LOCUS AEC10828.1 760 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002685-7439
PROTEIN_ID AEC10828.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47330"
/gene_synonym="T8I13.17"
/inference="Similar to RNA sequence,
EST:INSD:EL172160.1,INSD:BP585421.1,INSD:BP798681.1,
INSD:ES120792.1,INSD:AA394716.1,INSD:AA597305.1,
INSD:DR363934.1,INSD:BP791229.1,INSD:DR225660.1,
INSD:EH880491.1,INSD:BP634885.1,INSD:BP572898.1,
INSD:BP803992.1,INSD:AV793642.1,INSD:ES112028.1,
INSD:BP627298.1,INSD:BP595905.1,INSD:BP566727.1,
INSD:AI099662.1,INSD:BP609312.1,INSD:BP670574.1,
INSD:BX835603.1,INSD:BP615514.1,INSD:BP618533.1,
INSD:AV784143.1,INSD:BP594127.1,INSD:BP669169.1,
INSD:EH885678.1,INSD:BP565367.1,INSD:BP578686.1,
INSD:EG471531.1,INSD:BP582993.1,INSD:R30232.1,
INSD:BP639229.1,INSD:BP663213.1,INSD:AV829688.1,
INSD:BX838593.1,INSD:BP576623.1,INSD:BP568819.1,
INSD:EL072555.1,INSD:EL150703.1,INSD:BP812212.1,
INSD:BP593520.1,INSD:EL336254.1,INSD:BP593797.1,
INSD:BP647540.1,INSD:AV807398.1,INSD:ES104873.1,
INSD:EL135140.1,INSD:BP574537.1,INSD:BP662606.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY124871.1,INSD:AY057700.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; FUNCTIONS IN: helicase
activity, nucleic acid binding, ATP binding, ATP-dependent
helicase activity; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box
type, Q motif (InterPro:IPR014014), DNA/RNA helicase,
DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA
helicase, ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: P-loop containing nucleoside
triphosphate hydrolases superfamily protein
(TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins
in 3085 species: Archae - 817; Bacteria - 24489; Metazoa -
6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other
Eukaryotes - 8037 (source: NCBI BLink)."
/db_xref="Araport:AT2G47330"
/db_xref="TAIR:AT2G47330"
intron_pos 201:1 (1/3)
intron_pos 611:0 (2/3)
intron_pos 744:2 (3/3)
BEGIN
1 MSNRKFGMEG FGINRQTSYS FERSQAPQRL YVPPSSRGGD NSEDADLDNI DYMENEEAEE
61 DIEEGGSAAA SGGEVDEIDP LDAFMEGIHQ EMKSAPPPKP KEKLERYKDD DDDPVESYLK
121 AKKDLGLTLA ADALNAGYNS DEEVYAAAKA VDAGMLDYDS DDNPIVVDKR KIEPITALDH
181 SSIDYEPINK DFYEELESIS GMTEQETTDY RQRLGIRVSG FDVHRPVKTF EDCGFSSQIM
241 SAIKKQAYEK PTAIQCQALP IVLSGRDVIG IAKTGSGKTA AFVLPMIVHI MDQPELQRDE
301 GPIGVICAPT RELAHQIFLE AKKFSKAYGL RVSAVYGGMS KHEQFKELKA GCEIVVATPG
361 RLIDMLKMKA LTMMRASYLV LDEADRMFDL GFEPQVRSIV GQIRPDRQTL LFSATMPWKV
421 EKLAREILSD PIRVTVGEVG MANEDITQVV NVIPSDAEKL PWLLEKLPGM IDEGDVLVFA
481 SKKATVDEIE AQLTLNSFKV AALHGDKDQA SRMETLQKFK SGVHHVLIAT DVAARGLDIK
541 SLKTVVNYDI AKDMDMHVHR IGRTGRAGDR DGVAYTLVTQ REARFAGELV NSLVAAGQNV
601 PPELTDLAMK DGRFKSKRDG RKGGKKGRGG GGGNKGVRGV DFGLGIGFSS ESSRTPSSKA
661 APSRSGAINS VRTGVMAQFK NSFVAATPSN PQNQAYPNKR PSLMGFVSGG TIGGDMGRTQ
721 SQAPPVAPTQ NASSHNSSQN HSQSSENRPR ERKRRSGWDN
//