LOCUS AEC10826.1 512 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana flowering time control protein-related
/ FCA gamma-like protein protein.
ACCESSION CP002685-7437
PROTEIN_ID AEC10826.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47310"
/gene_synonym="T8I13.15"
/inference="Similar to RNA sequence,
EST:INSD:AU228937.1,INSD:DR356009.1,INSD:DR383742.1,
INSD:ES168949.1,INSD:BE526466.1,INSD:DR354134.1,
INSD:AV544726.1,INSD:ES170777.1,INSD:AV553204.1,
INSD:EG443038.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT015132.1,INSD:BT015799.1,INSD:BX820673.1,
INSD:BX820213.1,INSD:AK229352.1"
/note="flowering time control protein-related / FCA
gamma-related; FUNCTIONS IN: RNA binding, nucleotide
binding, nucleic acid binding; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Ribonucleoprotein, BRUNO-like
(InterPro:IPR015903), WW/Rsp5/WWP (InterPro:IPR001202),
Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
BEST Arabidopsis thaliana protein match is: RNA
binding;abscisic acid binding (TAIR:AT4G16280.4); Has
13219 Blast hits to 10590 proteins in 472 species: Archae
- 0; Bacteria - 420; Metazoa - 8082; Fungi - 1429; Plants
- 2128; Viruses - 0; Other Eukaryotes - 1160 (source: NCBI
BLink)."
/db_xref="Araport:AT2G47310"
/db_xref="TAIR:AT2G47310"
intron_pos 103:1 (1/12)
intron_pos 126:0 (2/12)
intron_pos 152:1 (3/12)
intron_pos 180:0 (4/12)
intron_pos 197:1 (5/12)
intron_pos 226:0 (6/12)
intron_pos 248:1 (7/12)
intron_pos 275:0 (8/12)
intron_pos 296:2 (9/12)
intron_pos 380:0 (10/12)
intron_pos 429:0 (11/12)
intron_pos 492:0 (12/12)
BEGIN
1 MERRAPNAFP GAPPPVPYYH NNYNNPPHHQ IHPPPPPHHH IAAVGFHKYP QNDNRDQRFN
61 QPHYSGQQQN MIVDQSNNAP PPFPPSPCGG SSLRKRRSQS ATDNADGSIA KLYVAPISKT
121 ATEYDIRQVF EKYGNVTEII LPKDKMTGER AAYCFIKYKK VEEGNAAIAA LTEQFTFPGE
181 MLPVKVRFAE AERERIGFAP VQLPDNPKLY VRCLNKQTTK MEVNEVFSRY GIIEDIYMAL
241 DDMKICRGYA FVQFSCKEMA LAAIKALNGL FTIRGSDQPL IVRFADPKKP RLGEQRSTFN
301 TPPAMQHFDP NWHSQPYPQW ENKEPAPPRV VQHHDFSSQP NHFPHQNTQA VSEVHKPLHQ
361 DIPPANFEKH QKSETASVET RSDGQKISSH SNAFHEDQNT VSSECDWSEH TCPNGNKYYF
421 HCITCESTWE KPDEYSMYER WLKEQTRLQD EKIKSPPLNN ESQEAIENSE QVESDVLQQN
481 GELQQPSLST ADQENNVVVY PVTTLAVETT CS
//