LOCUS AEC10816.1 701 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana agenet domain protein (DOMAIN OF
UNKNOWN FUNCTION 724 6) protein.
ACCESSION CP002685-7423
PROTEIN_ID AEC10816.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DUF6"
/locus_tag="AT2G47230"
/gene_synonym="ATDUF6"
/gene_synonym="DOMAIN OF UNKNOWN FUNCTION 724 6"
/gene_synonym="T8I13.7"
/inference="Similar to RNA sequence,
EST:INSD:ES151311.1,INSD:EG525978.1,INSD:ES021785.1,
INSD:ES088071.1,INSD:ES044544.1,INSD:ES167987.1,
INSD:ES050561.1,INSD:EG485106.1,INSD:ES137401.1,
INSD:ES207817.1,INSD:ES138320.1,INSD:ES002566.1,
INSD:ES129685.1,INSD:EH855443.1,INSD:EG525976.1,
INSD:AV538131.1,INSD:ES017333.1,INSD:ES026558.1,
INSD:ES059844.1,INSD:AU237015.1,INSD:ES047886.1,
INSD:ES082041.1,INSD:AU228029.1,INSD:EG485107.1,
INSD:EL072266.1,INSD:ES195725.1,INSD:ES106465.1"
/inference="similar to RNA sequence, mRNA:INSD:AK228604.1"
/note="DOMAIN OF UNKNOWN FUNCTION 724 6 (DUF6); FUNCTIONS
IN: RNA binding; INVOLVED IN: biological_process unknown;
LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet
(InterPro:IPR008395), Protein of unknown function DUF724
(InterPro:IPR007930); BEST Arabidopsis thaliana protein
match is: Agenet domain-containing protein
(TAIR:AT1G26540.1); Has 654 Blast hits to 571 proteins in
116 species: Archae - 0; Bacteria - 26; Metazoa - 156;
Fungi - 34; Plants - 356; Viruses - 0; Other Eukaryotes -
82 (source: NCBI BLink)."
/db_xref="Araport:AT2G47230"
/db_xref="TAIR:AT2G47230"
intron_pos 144:0 (1/7)
intron_pos 288:0 (2/7)
intron_pos 343:0 (3/7)
intron_pos 372:1 (4/7)
intron_pos 422:0 (5/7)
intron_pos 449:1 (6/7)
intron_pos 483:1 (7/7)
BEGIN
1 MEETIRKGSE VEVSSTEEGF ADAWFRGILQ ENPTKSGRKK LRVRYLTLLN DDALSPLIEN
61 IEPRFIRPVP PENEYNGIVL EEGTVVDADH KDGWWTGVII KKLENGKFWV YYDSPPDIIE
121 FERNQLRPHL RWSGWKWLRP DIQELDKSMF SSGTMAEVST IVDKAEVAWF PAMIIKEIEV
181 DGEKKFIVKD CNKHLSFSGD EARTNSTIDS SRVRPTPPPF PVEKYELMDR VEVFRGSVWR
241 QGLVRGVLDH NCYMVCLVVT KEEPVVKHSD LRPCKVWEDG VWQDGPKQTP VIETPSNVMK
301 TKPMRSCSGA KSMTPKRTTK HARRSLNLEK SAETLTKAES RAATGELRSK RANDVINDNT
361 PLVITPQVKP IASVEPVTPS RVRTATPLKQ TKADTQGKSS PKKTLEPMRD ENGLENSTRQ
421 KVLEEKNSEK KGRKRKRQEE HNSDLKETDE SCNGQMAEIN DTSSICNDVD DQPLAAWINL
481 PTETSIDHSP IVVNNAAIAT DVEERQANDT LMILPFAKKS PFWKMYETQE VCKIAPQSPH
541 FSPLFEAKEE LREWTAVGMM VSFYGLLEEV KNLQLDVSPS TLGSLSCSFA ELEKHGFDVA
601 APQSRINKML SLQDERAKKA EERKGLEKKI EAGEIEGHTY EEEMAELELK ILELKRQQVV
661 AKEMKEATDK VTSGMKSYAE MINQEIEDLR LEFQSTASAP W
//