LOCUS AEC10806.1 257 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NAD(P)-binding Rossmann-fold superfamily
protein protein.
ACCESSION CP002685-7409
PROTEIN_ID AEC10806.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SDR5"
/locus_tag="AT2G47140"
/gene_synonym="AtSDR5"
/gene_synonym="F14M4.3"
/gene_synonym="short-chain dehydrogenase reductase 5"
/inference="Similar to RNA sequence,
EST:INSD:EL049539.1,INSD:AV783225.1,INSD:AV822452.1,
INSD:ES063925.1,INSD:EH822243.1,INSD:ES088711.1"
/inference="similar to RNA sequence, mRNA:INSD:AF370319.1"
/note="NAD(P)-binding Rossmann-fold superfamily protein;
FUNCTIONS IN: oxidoreductase activity, binding, catalytic
activity; INVOLVED IN: oxidation reduction, metabolic
process; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 6 plant structures; EXPRESSED DURING: 4 anthesis,
LP.10 ten leaves visible, petal differentiation and
expansion stage, LP.08 eight leaves visible, LP.12 twelve
leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding
domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase
(InterPro:IPR002347), Short-chain dehydrogenase/reductase
SDR (InterPro:IPR002198); BEST Arabidopsis thaliana
protein match is: NAD(P)-binding Rossmann-fold superfamily
protein (TAIR:AT2G47130.1); Has 112960 Blast hits to
112749 proteins in 3532 species: Archae - 956; Bacteria -
74077; Metazoa - 4904; Fungi - 6164; Plants - 2566;
Viruses - 5; Other Eukaryotes - 24288 (source: NCBI
BLink)."
/db_xref="Araport:AT2G47140"
/db_xref="TAIR:AT2G47140"
intron_pos 5:2 (1/2)
intron_pos 156:2 (2/2)
BEGIN
1 MSGKRLDGKI VIITGGASGI GAESVRLFTE HGARVVIVDV QDELGQNVAV SIGEDKASYY
61 HCDVTNETEV ENAVKFTVEK YGKLDVLFSN AGVIEPFVSI LDLNLNELDR TIAINLRGTA
121 AFIKHAARAM VEKGIRGSIV CTTSVAAEIA GTAPHGYTTS KHGLLGLIKS ASGGLGKYGI
181 RVNGVAPFGV ATPLVCNGFK MEPNVVEQNT SASANLKGIV LKARHVAEAA LFLASDESAY
241 VSGQNLAVDG GYSVVKP
//