LOCUS AEC10799.1 766 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc ion binding/nucleic acid binding
protein protein.
ACCESSION CP002685-7402
PROTEIN_ID AEC10799.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G47090"
/gene_synonym="F14M4.8"
/inference="Similar to RNA sequence,
EST:INSD:ES042816.1,INSD:T22036.1,INSD:ES196080.1,
INSD:AV806850.1,INSD:BP586983.1,INSD:AA585793.1,
INSD:AV829572.1,INSD:EL996071.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819324.1,INSD:AY057557.1,INSD:AY093980.1"
/note="zinc ion binding;nucleic acid binding; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; LOCATED IN:
intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger,
C2H2-like (InterPro:IPR015880), Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, C2H2-type
(InterPro:IPR007087); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT3G62240.1); Has 6997 Blast hits to 1745 proteins
in 389 species: Archae - 0; Bacteria - 1326; Metazoa -
1009; Fungi - 441; Plants - 119; Viruses - 26; Other
Eukaryotes - 4076 (source: NCBI BLink)."
/db_xref="Araport:AT2G47090"
/db_xref="TAIR:AT2G47090"
intron_pos 57:0 (1/6)
intron_pos 160:0 (2/6)
intron_pos 229:2 (3/6)
intron_pos 246:0 (4/6)
intron_pos 276:0 (5/6)
intron_pos 297:0 (6/6)
BEGIN
1 MDDSCAVCAE NLEWVGYGSC GHREVCSTCV VRLRFILNDR RCCICKTECP VVFVTKALGD
61 YTKTISDFST TFPSVPKEGR VGSFWYHEET NVYFDDLNHY TRIKAMCRLS CNLCNDTNKT
121 RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM CSLCLVGRKV FICEQKLFTK GQLNQHISSG
181 DSEVDGSESE RGGFTGHPMC EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN
241 YDDLEVHFRS DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS
301 FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG ESSFPPLSVQ
361 ANQGQSRFGQ NSESLVSNTT TTRQRHRANQ GQSRFGQNSE SLVSNTTTTR QRHQTNRSAT
421 SGSSQAWPAL NRGPAEISIT SRVQSSGASA QSQSRHHDRV ESTRTLASAV PQDARTTVGG
481 CSSGSSLSSA NATKRNNHHS SSTPKMSETR SLAQPSHSDS PQISAVKNRR SSSTSANAGN
541 IQVAQGVSDV QSDNKSLVEK IHASLGHDEE LFMAFKNTSG KYRHGSIDAR TYLEYVKGYG
601 LSHLVLDMAR LCPDPQRQKE LIDTHNACLK GGNKGKAVKV ESSSDSKGDR FVDTVRKLQF
661 SDKSQDKDKD KDAYRSDKGK TKVTTLVNSS SAGVGLGDTG KQPKKTSKFL RTRLGEKSMA
721 AVLDLRNSNP EPEPEPKNDN SKRSQNSPGG LPLRGAWKRG SAKLFV
//