LOCUS AEC10791.1 595 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Plant invertase/pectin methylesterase
inhibitor superfamily protein.
ACCESSION CP002685-7388
PROTEIN_ID AEC10791.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="VGD1"
/locus_tag="AT2G47040"
/gene_synonym="F14M4.13"
/gene_synonym="VANGUARD1"
/inference="Similar to RNA sequence,
EST:INSD:BP586818.1,INSD:BP819523.1,INSD:BP659425.1,
INSD:DR280779.1,INSD:DR259591.1,INSD:BP653284.1,
INSD:BP828637.1,INSD:ES086678.1,INSD:BP814426.1,
INSD:BP651102.1,INSD:BP637212.1,INSD:BP817843.1,
INSD:BP816043.1,INSD:BP638440.1,INSD:BP656847.1,
INSD:BP651427.1,INSD:BP813435.1,INSD:AV827793.1,
INSD:AV823122.1,INSD:DR231824.1,INSD:BP838808.1,
INSD:BP651873.1,INSD:T42859.1,INSD:DR259589.1,
INSD:BP657957.1,INSD:BP823978.1,INSD:ES113017.1,
INSD:BP594697.1,INSD:BP838197.1,INSD:BP818523.1,
INSD:EG471290.1,INSD:BP814069.1,INSD:AV784042.1,
INSD:BP660131.1,INSD:AV537832.1,INSD:BP834240.1,
INSD:BP592929.1,INSD:ES207463.1,INSD:BP826107.1,
INSD:BP641103.1,INSD:AV555940.1,INSD:AV530962.1,
INSD:BP588767.1,INSD:BP591783.1,INSD:BP814670.1,
INSD:BP637424.1,INSD:BP795732.1,INSD:BP820261.1,
INSD:AV799426.1,INSD:BP644268.1,INSD:BP658162.1,
INSD:DR259588.1,INSD:BP825045.1,INSD:BP785855.1,
INSD:BP824607.1,INSD:AV534737.1,INSD:BP824242.1,
INSD:DR356483.1,INSD:AV531881.1,INSD:BP643989.1,
INSD:BP823020.1,INSD:BP838296.1,INSD:BP777952.1,
INSD:BP836813.1,INSD:BP830291.1,INSD:BP834724.1,
INSD:BP590779.1,INSD:BP644075.1,INSD:BP657873.1,
INSD:BP645353.1,INSD:DR380128.1,INSD:BP657632.1,
INSD:BP825364.1,INSD:AV534826.1,INSD:EG454827.1,
INSD:DR280783.1,INSD:AA395224.1,INSD:DR280781.1,
INSD:BP645706.1,INSD:BP837372.1,INSD:BP596979.1,
INSD:EG484511.1,INSD:DR259590.1,INSD:DR382758.1,
INSD:BP639053.1,INSD:BP817899.1,INSD:BP594073.1,
INSD:DR259587.1,INSD:DR280780.1,INSD:AV534793.1,
INSD:DR259592.1,INSD:BP657952.1,INSD:Z18193.1,
INSD:BP648246.1,INSD:BP790211.1,INSD:BP641357.1,
INSD:BP825043.1,INSD:DR354834.1,INSD:BP829727.1,
INSD:BP637788.1,INSD:BP820736.1,INSD:BP645358.1,
INSD:BP835041.1,INSD:BP818615.1,INSD:AV549883.1,
INSD:BP647305.1,INSD:EG471279.1,INSD:ES105189.1,
INSD:BP637598.1,INSD:BP591958.1,INSD:BP786774.1,
INSD:BP823324.1,INSD:DR231825.1,INSD:BP652083.1,
INSD:BP838395.1,INSD:BP824027.1,INSD:DR223331.1,
INSD:DR280782.1,INSD:BP653061.1,INSD:AV535576.1,
INSD:BP658588.1,INSD:BP596477.1,INSD:DR259593.1,
INSD:BP823449.1,INSD:BP826690.1,INSD:BP658797.1,
INSD:BP835916.1,INSD:BP652839.1"
/inference="similar to RNA sequence,
mRNA:INSD:AJ250430.1,INSD:BT001120.1,INSD:AY091768.1,
INSD:AY830948.1"
/note="VANGUARD1 (VGD1); FUNCTIONS IN: enzyme inhibitor
activity, pectinesterase activity; INVOLVED IN: pollen
tube growth; LOCATED IN: endomembrane system, cell wall,
plant-type cell wall; EXPRESSED IN: male gametophyte,
flower, pollen tube; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: Pectinesterase, active site
(InterPro:IPR018040), Pectin lyase fold/virulence factor
(InterPro:IPR011050), Pectinesterase, catalytic
(InterPro:IPR000070), Pectinesterase inhibitor
(InterPro:IPR006501), Pectin lyase fold
(InterPro:IPR012334); BEST Arabidopsis thaliana protein
match is: Plant invertase/pectin methylesterase inhibitor
superfamily (TAIR:AT2G47030.1); Has 2977 Blast hits to
2908 proteins in 464 species: Archae - 6; Bacteria - 891;
Metazoa - 1; Fungi - 197; Plants - 1856; Viruses - 0;
Other Eukaryotes - 26 (source: NCBI BLink)."
/db_xref="Araport:AT2G47040"
/db_xref="TAIR:AT2G47040"
intron_pos 367:1 (1/1)
BEGIN
1 MIGKVVVSVA SILLIVGVAI GVVAYINKNG DANLSPQMKA VRGICEATSD KASCVKTLEP
61 VKSDDPNKLI KAFMLATRDA ITQSSNFTGK TEGNLGSGIS PNNKAVLDYC KKVFMYALED
121 LSTIVEEMGE DLNQIGSKID QLKQWLTGVY NYQTDCLDDI EEDDLRKTIG EGIASSKILT
181 SNAIDIFHTV VSAMAKLNLK VEDFKNMTGG IFAPSDKGAA PVNKGTPPVA DDSPVADPDG
241 PARRLLEDID ETGIPTWVSG ADRKLMTKAG RGSNDGGARI RATFVVAKDG SGQFKTVQQA
301 VNACPEKNPG RCIIHIKAGI YREQVIIPKK KNNIFMFGDG ARKTVISYNR SVKLSPGTTT
361 SLSGTVQVES EGFMAKWIGF KNTAGPMGHQ AVAIRVNGDR AVIFNCRFDG YQDTLYVNNG
421 RQFYRNIVVS GTVDFIFGKS ATVIQNSLIV VRKGNKGQFN TVTADGNEKG LAMKIGIVLQ
481 NCRIVPDKKL AAERLIVESY LGRPWKKFST TVIINSEIGD VIRPEGWKIW DGESFHKSCR
541 YVEYNNRGPG AITNRRVNWV KIARSAAEVN DFTVANWLGP INWIQEANVP VTLGL
//