LOCUS AEC10729.1 224 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
family protein protein.
ACCESSION CP002685-7292
PROTEIN_ID AEC10729.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RS31a"
/locus_tag="AT2G46610"
/gene_synonym="arginine/serine-rich splicing factor 31a"
/gene_synonym="At-RS31a"
/gene_synonym="F13A10.14"
/inference="Similar to RNA sequence,
EST:INSD:BP605883.1,INSD:CB260592.1,INSD:AV804902.1,
INSD:EG427882.1,INSD:BP648622.1,INSD:BP850974.1,
INSD:BP644945.1,INSD:BP578465.1,INSD:AV785348.1,
INSD:BP626911.1,INSD:EL136695.1,INSD:DR377093.1,
INSD:BP574956.1,INSD:CB253407.1,INSD:EH849317.1,
INSD:BP616086.1,INSD:EH976273.1,INSD:BP791171.1,
INSD:BP803831.1,INSD:ES213136.1,INSD:BP580644.1,
INSD:DR306339.1,INSD:BP626762.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820508.1,INSD:BX820396.1"
/note="RNA-binding (RRM/RBD/RNP motifs) family protein;
FUNCTIONS IN: RNA binding, nucleotide binding, nucleic
acid binding; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 12 growth stages;
CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: RNA-binding (RRM/RBD/RNP motifs) family protein
(TAIR:AT3G61860.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G46610"
/db_xref="TAIR:AT2G46610"
intron_pos 10:1 (1/4)
intron_pos 48:0 (2/4)
intron_pos 126:2 (3/4)
intron_pos 215:2 (4/4)
BEGIN
1 MYTSLHIDAG YAFVYFEDER DAEDAIRRTD NTTFGYGRRK LSVEWAKDFQ GERGKPRDGK
61 AVSNQRPTKT LFVINFDPIR TRERDMERHF EPYGKVLNVR MRRNFAFVQF ATQEDATKAL
121 DSTHNSKLLD KVVSVEYALR EAGEREDRYA GSRRRRSPSP VYRRRPSPDY TRRRSPEYDR
181 YKGPAPYERR KSPDYGRRSS DYGRARARSP GYDRSRSPIQ RARG
//