LOCUS AEC10662.1 196 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PIN domain-like family protein protein.
ACCESSION CP002685-7201
PROTEIN_ID AEC10662.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G46230"
/gene_synonym="T3F17.12"
/inference="Similar to RNA sequence,
EST:INSD:ES142274.1,INSD:ES129019.1,INSD:EL970219.1,
INSD:DR346888.1,INSD:AU231100.1,INSD:ES106073.1,
INSD:ES000912.1,INSD:DR248057.1,INSD:AV525471.1,
INSD:DR248062.1,INSD:CB255053.1,INSD:ES070015.1,
INSD:CK118864.1,INSD:EL287130.1,INSD:EL979475.1,
INSD:DR346889.1,INSD:DR376487.1,INSD:EG512659.1,
INSD:DR248060.1,INSD:EH873423.1,INSD:ES176751.1,
INSD:ES020473.1,INSD:BP780868.1,INSD:EL046231.1,
INSD:AV797321.1,INSD:AV802413.1,INSD:DR380643.1,
INSD:CD529659.1,INSD:ES158777.1,INSD:ES170597.1,
INSD:AV563370.1,INSD:DR248058.1,INSD:DR248056.1,
INSD:DR248061.1,INSD:EL225925.1,INSD:ES047993.1,
INSD:BP862571.1,INSD:AV440911.1,INSD:DR372092.1,
INSD:EL026942.1,INSD:BE522938.1,INSD:AV788464.1,
INSD:ES023244.1,INSD:CD528988.1,INSD:ES178150.1,
INSD:CK118054.1,INSD:EL256678.1,INSD:EL998571.1,
INSD:BP823003.1,INSD:AV827133.1,INSD:DR248059.1,
INSD:DR248065.1,INSD:AV793753.1,INSD:EL979547.1,
INSD:EL161632.1,INSD:ES126516.1,INSD:ES067401.1,
INSD:BP581538.1,INSD:AV541994.1,INSD:ES043672.1,
INSD:AV562493.1,INSD:ES103627.1,INSD:DR346887.1,
INSD:EL978356.1,INSD:ES052715.1,INSD:EL152771.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY058227.1,INSD:AF367351.1"
/note="PIN domain-like family protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF652
(InterPro:IPR006984), Nucleotide binding protein, PINc
(InterPro:IPR006596); BEST Arabidopsis thaliana protein
match is: PIN domain-like family protein
(TAIR:AT1G26530.1); Has 697 Blast hits to 697 proteins in
237 species: Archae - 32; Bacteria - 0; Metazoa - 241;
Fungi - 212; Plants - 105; Viruses - 0; Other Eukaryotes -
107 (source: NCBI BLink)."
/db_xref="Araport:AT2G46230"
/db_xref="TAIR:AT2G46230"
intron_pos 24:2 (1/8)
intron_pos 44:2 (2/8)
intron_pos 80:0 (3/8)
intron_pos 94:1 (4/8)
intron_pos 118:2 (5/8)
intron_pos 148:0 (6/8)
intron_pos 167:0 (7/8)
intron_pos 193:1 (8/8)
BEGIN
1 MGKAKKPQKF AVVKKMISHK ALKHYKEEVL NPNKKDLTEL PRNVPSVPAG LFFSYNSTLV
61 PPYRVLVDTN FINFSIQNKI DLEKGMRDCL YANCTPCITD CVMAELEKLG QKYRVALRIA
121 KDPHFERLPC IHKGTYADDC LVDRVTQHKC FIVATCDRDL KRRIRKIPGV PIMYVTNRKY
181 SIEKLPEATL GGAPRY
//