LOCUS AEC10649.1 221 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family protein.
ACCESSION CP002685-7185
PROTEIN_ID AEC10649.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G46150"
/gene_synonym="T3F17.20"
/inference="Similar to RNA sequence,
EST:INSD:EG475659.1,INSD:ES080248.1,INSD:EL245503.1,
INSD:ES144604.1,INSD:ES200525.1,INSD:EL990559.1,
INSD:EG442075.1,INSD:ES019669.1,INSD:ES121191.1,
INSD:EG441978.1,INSD:ES041694.1,INSD:EG441977.1,
INSD:AY649242.1,INSD:CB185726.2,INSD:EG442078.1,
INSD:EH872690.1,INSD:EG442080.1,INSD:ES152867.1,
INSD:ES139566.1,INSD:EL128864.1,INSD:ES114024.1,
INSD:EG441975.1,INSD:ES119814.1,INSD:EG441980.1,
INSD:EL981235.1,INSD:EG441951.1,INSD:EG441972.1,
INSD:EG442074.1,INSD:CB185798.1,INSD:ES202043.1,
INSD:EG442079.1,INSD:EG475666.1,INSD:EG441979.1,
INSD:EG442081.1,INSD:EG441970.1,INSD:EG475668.1,
INSD:ES201683.1,INSD:EG442072.1,INSD:EG441968.1,
INSD:EG442077.1,INSD:EG475662.1,INSD:EG442073.1,
INSD:EL994890.1,INSD:EG441974.1,INSD:ES087952.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821199.1,INSD:AY102565.1"
/note="Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Late
embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family
(TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 258; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="Araport:AT2G46150"
/db_xref="TAIR:AT2G46150"
BEGIN
1 MADSEHVRPL APATILPVSD ESASNIKNTH RSRNRIKCSI CVTATSLILT TIVLTLVFTV
61 FRVKDPIIKM NGVMVNGLDS VTGTNQVQLL GTNISMIVDV SVKNPNTASF KYSNTTTDIY
121 YKGTLVGEAH GLPGKARPHR TSRMNVTVDI MLDRILSDPG LGREISRSGL VNVWSYTRVG
181 GKVKIMGIVK KHVTVKMNCT MAVNITGQAI QDVDCKKKID L
//