LOCUS AEC10638.1 766 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein-like protein protein.
ACCESSION CP002685-7173
PROTEIN_ID AEC10638.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G46060"
/gene_synonym="T3F17.29"
/inference="Similar to RNA sequence,
EST:INSD:EG516819.1,INSD:BX839065.1,INSD:EH804647.1,
INSD:EL278508.1,INSD:ES104029.1,INSD:EL037261.1,
INSD:AV809029.1,INSD:BP779862.1,INSD:ES170604.1,
INSD:AV825928.1,INSD:AV552670.1,INSD:BX839812.1,
INSD:EH945489.1,INSD:AV792959.1,INSD:BP789385.1,
INSD:BX841019.1,INSD:EH978251.1,INSD:ES137262.1,
INSD:ES171751.1"
/inference="similar to RNA sequence, mRNA:INSD:AF462853.1"
/note="transmembrane protein-related; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF3522
(InterPro:IPR021910), EGF-like region, conserved site
(InterPro:IPR013032); Has 154 Blast hits to 154 proteins
in 53 species: Archae - 0; Bacteria - 0; Metazoa - 124;
Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink)."
/db_xref="Araport:AT2G46060"
/db_xref="TAIR:AT2G46060"
intron_pos 58:1 (1/12)
intron_pos 78:0 (2/12)
intron_pos 114:1 (3/12)
intron_pos 151:0 (4/12)
intron_pos 174:0 (5/12)
intron_pos 355:0 (6/12)
intron_pos 538:2 (7/12)
intron_pos 560:1 (8/12)
intron_pos 587:0 (9/12)
intron_pos 622:0 (10/12)
intron_pos 668:2 (11/12)
intron_pos 711:2 (12/12)
BEGIN
1 MAEILFLLLR TLVVFSCALS ICNCLQDAAD NNGNFFTVSS FRYPESEVRP YDTRYIRVDL
61 PPWFSSLNVA IESDVDITAK SISKISKSLL PVICFRDGSP PLPDASTNAL QGLELGRFFN
121 GSFERAQDSE IAQQCYPMQK NITLRLTNEQ ISPGAWYVGL FNGIGATRTQ GKMIVRSSAF
181 SFSANISVEG CKTATMWGPF CNQTIYPLSC SRFDNQTASV ISCADSFPSS CLTGAETKTY
241 ALDVDGIAEQ LVIMASNVKV DSNESYLMCY ARFEAFASET LHDYAADIHK VPLIVNKPKA
301 GRWYIVISLS GRENRFAQGT NSSSRVCFSI NVKVLGCPVG KAGPNCGQQI YILQAVMRRG
361 WLTPFQSYYF PVNDASLSGS STNFPLEPIV SNFSSIPELD TSTWTYFLMN IPQGGSGGHI
421 HFRLLSDSTI QYEVYLRFGG LPTIDDRDYY YVNRTSASRS MFFSLYNSSK EMVDFYILYA
481 REGTWSFGLR QLIDSNTPAA SRGSPTLVSL SLERCPRGCS SYGQCRYAFD ANGLTSYSFC
541 SCDRTHGGFD CSIEIVSHQE HIVQSIALIA SNAAALLPAY WALRQREYPE WVLFTSSGIS
601 SALYHACDVG TWCVLSYNVL QFMDFWLSFM AVVGTFVYLS TAGEAVKRTI HTVVAILTAL
661 LALTQATRAS NIIIVLAIGS LGLLIGFLVE FVTKYRSYCG SAGFSLNMLD RPRAVKEWFS
721 NLIKTLKKRF RWGFVAAGLV AFTMAAISFK VETSSSYWMW HRCVCM
//