LOCUS AEC10635.1 562 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ARID/BRIGHT AND ELM2 DNA-binding
domain-containing protein protein.
ACCESSION CP002685-7169
PROTEIN_ID AEC10635.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G46040"
/gene_synonym="ARID1"
/gene_synonym="AT-Rich Interacting Domain 1"
/gene_synonym="T3F17.31"
/inference="Similar to RNA sequence,
EST:INSD:AU227739.1,INSD:ES146497.1,INSD:ES154837.1,
INSD:ES146616.1,INSD:BP593733.1,INSD:EH985859.1,
INSD:ES092370.1,INSD:BP595571.1,INSD:EH965097.1,
INSD:EL309177.1,INSD:AU236763.1,INSD:EL135153.1,
INSD:ES148800.1,INSD:ES213713.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT003984.1,INSD:BT005067.1"
/note="ARID/BRIGHT DNA-binding domain;ELM2 domain protein;
FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process
unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm
cell, male gametophyte, cultured cell, seed, pollen tube;
EXPRESSED DURING: M germinated pollen stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2
(InterPro:IPR000949), ARID/BRIGHT DNA-binding domain
(InterPro:IPR001606); BEST Arabidopsis thaliana protein
match is: ARID/BRIGHT DNA-binding domain;ELM2 domain
protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184
proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa
- 35; Fungi - 2; Plants - 156; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink)."
/db_xref="Araport:AT2G46040"
/db_xref="TAIR:AT2G46040"
intron_pos 310:0 (1/1)
BEGIN
1 MAGWSMVADE DAVDYSKTPK SLDANRSPES VNPESTGFEK KIKELISLFR PLLDSFLAEF
61 CSADGFLPLP AMTGEGRTVD LFNLFLNVTH KGGFDAVSEN GSWDEVVQES GLESYDSASA
121 KLIYVKYLDA FGRWLNRVVA GDTDVSSVEL SGISDALVAR LNGFLSEVKK KYELRKGRPA
181 KELGAELKWF ISKTKRRYDK HHVGKESASN DAVKEFQGSK LAERRLEQIM ILESVTQECS
241 SPGKRKRECP LETLKWLSDV AKDPCDPSLG IVPDRSEWVS YGSEEPWKQL LLFRASRTNN
301 DSACEKTWQK VQKMHPCLYD DSAGASYNLR ERLSYEDYKR GKTGNGSDIG SSDEEDRPCA
361 LVGSKFQAKV PEWTGITPES DSKWLGTRIW PLTKEQTKAN LLIERDRIGK GRQDPCGCHN
421 PGSIECVKFH ITAKRDKLKL ELGPAFYMWC FDVMGECTLQ YWTDLELKKI KSLMSSPPSL
481 SPAFIHQAKM ILPSKSRGKI VSYFYNVTLL QYRASQSRIT PHDIDSDTDQ IFLRATENEN
541 PAPEANTFQK PALLSPNKKR CR
//