LOCUS AEC10633.1 2192 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription regulatory protein SNF2 protein.
ACCESSION CP002685-7158
PROTEIN_ID AEC10633.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="BRM"
/locus_tag="AT2G46020"
/gene_synonym="ARABIDOPSIS THALIANA BRAHMA"
/gene_synonym="ATBRM"
/gene_synonym="BRAHMA"
/gene_synonym="CHA2"
/gene_synonym="CHR2"
/gene_synonym="CHROMATIN REMODELING 2"
/gene_synonym="T3F17.33"
/inference="Similar to RNA sequence,
EST:INSD:EL982774.1,INSD:CD534998.1,INSD:EG518928.1,
INSD:EH804788.1,INSD:EL078753.1,INSD:EL166782.1,
INSD:EL018271.1,INSD:EH857850.1,INSD:ES158852.1,
INSD:W43888.1,INSD:ES030722.1,INSD:ES098186.1,
INSD:ES039521.1,INSD:ES197893.1,INSD:BE530328.1,
INSD:EL994867.1,INSD:EL015229.1,INSD:EL246671.1,
INSD:ES100001.1,INSD:EL989500.1,INSD:EH877208.1,
INSD:ES057828.1,INSD:CK120336.1,INSD:AV529112.1,
INSD:EL179051.1,INSD:ES016380.1,INSD:EH901215.1,
INSD:CK121747.1,INSD:CB518229.1,INSD:ES054570.1,
INSD:ES016375.1,INSD:EL073719.1,INSD:EH955763.1,
INSD:EL998427.1,INSD:EL037539.1,INSD:AV528359.1,
INSD:AV522825.1,INSD:EH931633.1,INSD:ES007531.1,
INSD:EH802129.1,INSD:EL314856.1,INSD:EH832517.1,
INSD:ES113687.1,INSD:EG526044.1,INSD:EG454169.1,
INSD:EG481622.1,INSD:EH854545.1,INSD:EH879494.1,
INSD:EH976868.1,INSD:EG518927.1,INSD:EG481623.1,
INSD:AV523439.1,INSD:W43821.1,INSD:ES121334.1,
INSD:EH961309.1,INSD:EL077586.1,INSD:EG454167.1,
INSD:ES024633.1,INSD:EL226792.1,INSD:ES000738.1"
/note="BRAHMA (BRM); FUNCTIONS IN: helicase activity,
transcription regulator activity, DNA binding, ATP
binding; INVOLVED IN: ATP-dependent chromatin remodeling,
organ boundary specification between lateral organs and
the meristem, regulation of gene expression, epigenetic;
LOCATED IN: cytosol, nucleus, chromatin remodeling
complex; EXPRESSED IN: 31 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978),
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021), Bromodomain (InterPro:IPR001487),
SNF2-related (InterPro:IPR000330); BEST Arabidopsis
thaliana protein match is: P-loop containing nucleoside
triphosphate hydrolases superfamily protein
(TAIR:AT2G28290.3); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G46020"
/db_xref="TAIR:AT2G46020"
intron_pos 59:0 (1/13)
intron_pos 484:0 (2/13)
intron_pos 920:0 (3/13)
intron_pos 957:2 (4/13)
intron_pos 987:0 (5/13)
intron_pos 1016:0 (6/13)
intron_pos 1047:0 (7/13)
intron_pos 1080:0 (8/13)
intron_pos 1142:0 (9/13)
intron_pos 1223:0 (10/13)
intron_pos 1739:0 (11/13)
intron_pos 1903:0 (12/13)
intron_pos 1986:0 (13/13)
BEGIN
1 MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ
61 QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ QSRNFFESPQ QQQQQQQQGS
121 STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP
181 SSQPQASSSK PSGDQFARGE RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA
241 QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
301 ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV
361 NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE TPVLDQNAST KKSLGPAEHL
421 QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR
481 RLKKGEGSLP PELLQAISPP PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ
541 AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
601 QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF
661 FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK RTDSLKKING LLAKNLERKR
721 IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR
781 QVLANQKAVR EKQLKTIFQW RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG
841 RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
901 NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT
961 LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL NGILADEMGL GKTVQVMALI
1021 AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF
1081 NVLVTTYEFI MYDRSKLSKV DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL
1141 QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201 QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ
1261 KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD FLVRSCGKLW ILDRILIKLQ
1321 RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL
1381 LSIRAAGRGL NLQTADTVVI YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS
1441 HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501 EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH
1561 EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG GPGGERKRGR PKSKKINYKE
1621 IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD
1681 YPPGSGSYKK NPPRDDAGSS GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD
1741 DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801 EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG
1861 RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ KRCKIVISKL QRRIDKEGQQ
1921 IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY
1981 GFSHEVRSEA KKVHNLFFDL LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG
2041 KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101 KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH
2161 PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
//