LOCUS AEC10632.1 2193 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription regulatory protein SNF2 protein.
ACCESSION CP002685-7161
PROTEIN_ID AEC10632.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="BRM"
/locus_tag="AT2G46020"
/gene_synonym="ARABIDOPSIS THALIANA BRAHMA"
/gene_synonym="ATBRM"
/gene_synonym="BRAHMA"
/gene_synonym="CHA2"
/gene_synonym="CHR2"
/gene_synonym="CHROMATIN REMODELING 2"
/gene_synonym="T3F17.33"
/inference="Similar to RNA sequence,
EST:INSD:EL982774.1,INSD:CD534998.1,INSD:EG518928.1,
INSD:EH804788.1,INSD:ES019493.1,INSD:EL078753.1,
INSD:EL166782.1,INSD:EL018271.1,INSD:ES158852.1,
INSD:EH857850.1,INSD:W43888.1,INSD:ES030722.1,
INSD:ES098186.1,INSD:ES039521.1,INSD:ES197893.1,
INSD:BE530328.1,INSD:EL994867.1,INSD:EL015229.1,
INSD:EL246671.1,INSD:ES100001.1,INSD:EL989500.1,
INSD:ES057828.1,INSD:EH877208.1,INSD:DR350987.1,
INSD:CK120336.1,INSD:AV529112.1,INSD:EL179051.1,
INSD:ES016380.1,INSD:EH901215.1,INSD:CK121747.1,
INSD:CB518229.1,INSD:ES054570.1,INSD:ES080759.1,
INSD:ES016375.1,INSD:EL073719.1,INSD:EH955763.1,
INSD:EL998427.1,INSD:EL037539.1,INSD:AV528359.1,
INSD:AV522825.1,INSD:EH931633.1,INSD:ES007531.1,
INSD:EH802129.1,INSD:EL314856.1,INSD:EH832517.1,
INSD:ES113687.1,INSD:EG526044.1,INSD:EG454169.1,
INSD:EG481622.1,INSD:EH854545.1,INSD:EH879494.1,
INSD:EH976868.1,INSD:EG518927.1,INSD:EL240039.1,
INSD:EL022217.1,INSD:EG481623.1,INSD:AV523439.1,
INSD:W43821.1,INSD:ES121334.1,INSD:EH961309.1,
INSD:EL077586.1,INSD:EG454167.1,INSD:ES024633.1,
INSD:EL226792.1,INSD:ES000738.1"
/inference="similar to RNA sequence, mRNA:INSD:AJ703891.1"
/note="BRAHMA (BRM); FUNCTIONS IN: helicase activity,
transcription regulator activity, DNA binding, ATP
binding; INVOLVED IN: ATP-dependent chromatin remodeling,
organ boundary specification between lateral organs and
the meristem, regulation of gene expression, epigenetic;
LOCATED IN: cytosol, nucleus, chromatin remodeling
complex; EXPRESSED IN: 31 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021), Bromodomain (InterPro:IPR001487),
SNF2-related (InterPro:IPR000330); BEST Arabidopsis
thaliana protein match is: P-loop containing nucleoside
triphosphate hydrolases superfamily protein
(TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G46020"
/db_xref="TAIR:AT2G46020"
intron_pos 59:0 (1/13)
intron_pos 484:0 (2/13)
intron_pos 920:0 (3/13)
intron_pos 957:2 (4/13)
intron_pos 987:0 (5/13)
intron_pos 1016:0 (6/13)
intron_pos 1047:0 (7/13)
intron_pos 1075:0 (8/13)
intron_pos 1143:0 (9/13)
intron_pos 1224:0 (10/13)
intron_pos 1740:0 (11/13)
intron_pos 1904:0 (12/13)
intron_pos 1987:0 (13/13)
BEGIN
1 MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ
61 QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ QSRNFFESPQ QQQQQQQQGS
121 STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP
181 SSQPQASSSK PSGDQFARGE RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA
241 QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
301 ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV
361 NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE TPVLDQNAST KKSLGPAEHL
421 QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR
481 RLKKGEGSLP PELLQAISPP PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ
541 AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
601 QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF
661 FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK RTDSLKKING LLAKNLERKR
721 IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR
781 QVLANQKAVR EKQLKTIFQW RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG
841 RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
901 NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT
961 LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL NGILADEMGL GKTVQVMALI
1021 AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK
1081 FNVLVTTYEF IMYDRSKLSK VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP
1141 LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201 HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA
1261 QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK DFLVRSCGKL WILDRILIKL
1321 QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF
1381 LLSIRAAGRG LNLQTADTVV IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS
1441 SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501 HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN
1561 HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP GGPGGERKRG RPKSKKINYK
1621 EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY
1681 DYPPGSGSYK KNPPRDDAGS SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL
1741 DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801 SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS
1861 GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII QKRCKIVISK LQRRIDKEGQ
1921 QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF
1981 YGFSHEVRSE AKKVHNLFFD LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ
2041 GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101 CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT
2161 HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
//