LOCUS AEC10617.1 400 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana U-box domain-containing protein protein.
ACCESSION CP002685-7136
PROTEIN_ID AEC10617.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G45920"
/gene_synonym="F4I18.10"
/inference="Similar to RNA sequence,
EST:INSD:AV546062.1,INSD:BP796432.1,INSD:R90713.1,
INSD:AI992468.1,INSD:EL282901.1,INSD:BP853843.1,
INSD:EG444453.1,INSD:EG444442.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT015764.1,INSD:BX820658.1,INSD:AK175182.1,
INSD:BT020181.1"
/note="U-box domain-containing protein; FUNCTIONS IN:
ubiquitin-protein ligase activity; INVOLVED IN: protein
ubiquitination; LOCATED IN: ubiquitin ligase complex;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: U box domain
(InterPro:IPR003613); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT3G61390.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G45920"
/db_xref="TAIR:AT2G45920"
intron_pos 75:0 (1/5)
intron_pos 115:2 (2/5)
intron_pos 150:2 (3/5)
intron_pos 228:0 (4/5)
intron_pos 336:0 (5/5)
BEGIN
1 MMGKSGSQQL LMDEKIYVAV GSDLGNKSTL VWAIQNTGGK EFCIVHVHQP LYRKEKEKTQ
61 KILDKYLQKC RQMQVCAEMI HIKMESVEKG IIQLISERNV KKLVMGAASD TRYSMRMADL
121 LSTKAIYIRQ EAPATCCIWF TCKGYLVYKR ESIMGNTSLE YASTSSGQDS VRSRGSVIPS
181 RQFTISRGNG NVYQLAVFEA EKSKKEASLE AFKHQEVVKE KNEAIKRGKE WESAYLEELK
241 QRKETEMELK KVREKLEKMR YISENRITES YMLVQKLQDK YNLATKVLRK AKEERDLLIK
301 GRDIAIIEVE ELRKEVSRSD EHREAPQYFI CPISLEVMKD PQLAADGFTY EAEAISTWLQ
361 GGHETSPMTN TKLHHTKLVP NLALRSAIQE WLHASSSFRK
//