LOCUS AEC10604.1 528 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEA(D/H)-box RNA helicase family
protein protein.
ACCESSION CP002685-7113
PROTEIN_ID AEC10604.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G45810"
/gene_synonym="F4I18.21"
/inference="Similar to RNA sequence,
EST:INSD:AV536011.1,INSD:EL225552.1,INSD:BP600893.1,
INSD:EL203218.1,INSD:EH913440.1,INSD:EL033362.1,
INSD:EL181425.1,INSD:EH970989.1,INSD:BP802479.1,
INSD:ES019524.1,INSD:EL210310.1,INSD:BP609598.1,
INSD:AV534489.1,INSD:EL331105.1,INSD:EL016839.1,
INSD:BP604663.1,INSD:EL159945.1,INSD:AV567300.1,
INSD:ES195750.1,INSD:CF652382.1,INSD:CB260065.1,
INSD:AV822153.1,INSD:EL993328.1,INSD:ES189747.1,
INSD:CB262230.1,INSD:BP866922.1,INSD:EL293133.1,
INSD:CF652381.1,INSD:DR383394.1,INSD:EH822235.1,
INSD:EL241121.1,INSD:BP609332.1,INSD:DR369526.1,
INSD:BP593011.1,INSD:BP624594.1,INSD:AV524463.1,
INSD:BP620079.1,INSD:EH804431.1,INSD:T42319.1,
INSD:EL015016.1,INSD:ES170056.1,INSD:EH834045.1,
INSD:CK120983.1,INSD:ES185322.1,INSD:ES121563.1,
INSD:AV805285.1,INSD:BP603361.1,INSD:AV782825.1,
INSD:BP621667.1,INSD:BE526723.1,INSD:BP808055.1,
INSD:CB259741.1,INSD:BP798035.1,INSD:EL260545.1,
INSD:EH975588.1,INSD:BP592501.1,INSD:BP603191.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY039862.1,INSD:BT002709.1"
/note="DEA(D/H)-box RNA helicase family protein; FUNCTIONS
IN: helicase activity, ATP-dependent helicase activity,
nucleic acid binding, ATP binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif
(InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box
type, N-terminal (InterPro:IPR011545), RNA helicase,
ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: DEA(D/H)-box RNA helicase
family protein (TAIR:AT3G61240.2); Has 68232 Blast hits to
53527 proteins in 3291 species: Archae - 672; Bacteria -
23017; Metazoa - 14526; Fungi - 7874; Plants - 4320;
Viruses - 271; Other Eukaryotes - 17552 (source: NCBI
BLink)."
/db_xref="Araport:AT2G45810"
/db_xref="TAIR:AT2G45810"
intron_pos 126:2 (1/8)
intron_pos 147:0 (2/8)
intron_pos 225:1 (3/8)
intron_pos 305:0 (4/8)
intron_pos 389:0 (5/8)
intron_pos 449:1 (6/8)
intron_pos 479:0 (7/8)
intron_pos 503:2 (8/8)
BEGIN
1 MNNNNNNRGR FPPGIGAAGP GPDPNFQSRN PNPPQPQQYL QSRTPFPQQP QPQPPQYLQS
61 QSDAQQYVQR GYPQQIQQQQ QLQQQQQQQQ QQQEQQWSRR AQLPGDPSYI DEVEKTVQSE
121 AISDSNNEDW KATLKLPPRD NRYQTEDVTA TKGNEFEDYF LKRDLLRGIY EKGFEKPSPI
181 QEESIPIALT GSDILARAKN GTGKTGAFCI PTLEKIDPEN NVIQAVILVP TRELALQTSQ
241 VCKELSKYLK IEVMVTTGGT SLRDDIMRLY QPVHLLVGTP GRILDLAKKG VCVLKDCAML
301 VMDEADKLLS VEFQPSIEEL IQFLPESRQI LMFSATFPVT VKSFKDRYLK KPYIINLMDQ
361 LTLMGVTQYY AFVEERQKVH CLNTLFSKLQ INQSIIFCNS VNRVELLAKK ITELGYSCFY
421 IHAKMVQDHR NRVFHDFRNG ACRNLVCTDL FTRGIDIQAV NVVINFDFPR TSESYLHRVG
481 RSGRFGHLGL AVNLVTYEDR FKMYQTEQEL GTEIKPIPSL IDKAIYCQ
//