LOCUS AEC10587.1 367 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana shrunken seed protein (SSE1) protein.
ACCESSION CP002685-7093
PROTEIN_ID AEC10587.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SSE1"
/locus_tag="AT2G45690"
/gene_synonym="ARABIDOPSIS PEROXIN 16"
/gene_synonym="ATPEX16"
/gene_synonym="F17K2.22"
/gene_synonym="PEROXIN 16"
/gene_synonym="PEX16"
/gene_synonym="SHRUNKEN SEED 1"
/gene_synonym="SSE"
/inference="Similar to RNA sequence,
EST:INSD:ES000810.1,INSD:EH950689.1,INSD:BP783609.1,
INSD:AV521636.1,INSD:ES203075.1,INSD:BX836091.1,
INSD:BP868110.1,INSD:BP868649.1,INSD:BE525478.1,
INSD:EL974940.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820976.1,INSD:AF085354.1,INSD:AK175396.1,
INSD:AK175414.1"
/note="SHRUNKEN SEED 1 (SSE1); CONTAINS InterPro DOMAIN/s:
Peroxisome membrane protein, Pex16 (InterPro:IPR013919);
Has 261 Blast hits to 259 proteins in 120 species: Archae
- 0; Bacteria - 0; Metazoa - 102; Fungi - 93; Plants - 47;
Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink)."
/db_xref="Araport:AT2G45690"
/db_xref="TAIR:AT2G45690"
intron_pos 24:0 (1/6)
intron_pos 43:1 (2/6)
intron_pos 116:2 (3/6)
intron_pos 305:0 (4/6)
intron_pos 327:2 (5/6)
intron_pos 348:1 (6/6)
BEGIN
1 MEAYKQWVWR NREYVQSFGS FANGLTWLLP EKFSASEIGP EAVTAFLGIF STINEHIIEN
61 APTPRGHVGS SGNDPSLSYP LLIAILKDLE TVVEVAAEHF YGDKKWNYII LTEAMKAVIR
121 LALFRNSGYK MLLQGGETPN EEKDSNQSES QNRAGNSGRN LGPHGLGNQN HHNPWNLEGR
181 AMSALSSFGQ NARTTTSSTP GWSRRIQHQQ AVIEPPMIKE RRRTMSELLT EKGVNGALFA
241 IGEVLYITRP LIYVLFIRKY GVRSWIPWAI SLSVDTLGMG LLANSKWWGE KSKQVHFSGP
301 EKDELRRRKL IWALYLMRDP FFTKYTRQKL ESSQKKLELI PLIGFLTEKI VELLEGAQSR
361 YTYISGS
//