LOCUS AEC10580.1 152 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SIN3 associated polypeptide P18 protein.
ACCESSION CP002685-7086
PROTEIN_ID AEC10580.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SAP18"
/locus_tag="AT2G45640"
/gene_synonym="ATSAP18"
/gene_synonym="F17K2.17"
/gene_synonym="SIN3 ASSOCIATED POLYPEPTIDE 18"
/gene_synonym="SIN3 associated polypeptide P18"
/inference="Similar to RNA sequence,
EST:INSD:EH831425.1,INSD:BP570603.1,INSD:EH796919.1,
INSD:AV781759.1,INSD:DR307419.1,INSD:BP651517.1,
INSD:AV821346.2,INSD:ES128651.1,INSD:C99874.1,
INSD:BP653195.1,INSD:AV790063.1,INSD:EL341699.1,
INSD:DR307426.1,INSD:CB252878.1,INSD:CB252874.1,
INSD:EL977354.1,INSD:EL071209.1,INSD:ES068768.1,
INSD:F15306.1,INSD:ES138978.1,INSD:BP658750.1,
INSD:ES139714.1,INSD:ES034105.1,INSD:ES006239.1,
INSD:ES075747.1,INSD:DR307418.1,INSD:DR307413.1,
INSD:DR307425.1,INSD:DR307422.1,INSD:EL136947.1,
INSD:F15305.1,INSD:AV789836.1,INSD:DR307417.1,
INSD:BP575229.1,INSD:EL969508.1,INSD:EH862998.1,
INSD:BP575354.1,INSD:EH891915.1,INSD:ES166516.1,
INSD:EL119288.1,INSD:BP562681.3,INSD:EH872519.1,
INSD:EL145200.1,INSD:DR307420.1,INSD:EH974311.1,
INSD:DR307416.1,INSD:BP645932.1,INSD:DR307423.1,
INSD:ES031418.1,INSD:DR371605.1,INSD:BP795497.1,
INSD:ES130538.1,INSD:ES156884.1,INSD:ES000502.1,
INSD:DR307414.1,INSD:BP563528.1,INSD:DR307424.1,
INSD:EH917870.1,INSD:DR307421.1,INSD:BP625040.1,
INSD:AI999288.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK227453.1,INSD:AF378876.1,INSD:AY050474.1,
INSD:BX821721.1,INSD:AY088934.1"
/note="SIN3 associated polypeptide P18 (SAP18); FUNCTIONS
IN: protein binding, transcription regulator activity;
INVOLVED IN: response to salt stress, response to abscisic
acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide
p18 (InterPro:IPR010516), Histone deacetylase complex,
SAP18 subunit (InterPro:IPR017250); Has 294 Blast hits to
294 proteins in 125 species: Archae - 0; Bacteria - 0;
Metazoa - 174; Fungi - 52; Plants - 40; Viruses - 0; Other
Eukaryotes - 28 (source: NCBI BLink)."
/db_xref="Araport:AT2G45640"
/db_xref="TAIR:AT2G45640"
intron_pos 38:0 (1/5)
intron_pos 49:0 (2/5)
intron_pos 86:0 (3/5)
intron_pos 118:0 (4/5)
intron_pos 143:0 (5/5)
BEGIN
1 MAEAARRQGG GRPLPPPPRG VNQQPPRPKP EPVDREKTCP LLLRVFTKSG GHHTSEDYAV
61 RGKEPKDEVQ IYTWKDASLR ELTDLVKEVS VAARRRNARL SFAFVYPNNK GGYNVREVGE
121 TMAYPNRKQP DDSKTLSELP FEIGDYLDVA IY
//