LOCUS AEC10493.1 877 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF2 domain-containing protein /
helicase domain-containing protein protein.
ACCESSION CP002685-6965
PROTEIN_ID AEC10493.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ASG3"
/locus_tag="AT2G44980"
/gene_synonym="ALTERED SEED GERMINATION 3"
/gene_synonym="CHR10"
/gene_synonym="chromatin remodeling 10"
/gene_synonym="T14P1.22"
/inference="Similar to RNA sequence,
EST:INSD:EH951926.1,INSD:CB518236.1,INSD:ES466898.1,
INSD:EL206361.1,INSD:AV546699.1,INSD:EL981087.1,
INSD:EL274851.1,INSD:ES466899.1,INSD:EL129980.1,
INSD:BP845606.1"
/note="SNF2 domain-containing protein / helicase
domain-containing protein; FUNCTIONS IN: transcription
regulator activity, helicase activity, DNA binding,
nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021), SNF2-related
(InterPro:IPR000330); BEST Arabidopsis thaliana protein
match is: chromatin remodeling factor17
(TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins
in 1958 species: Archae - 101; Bacteria - 5047; Metazoa -
3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other
Eukaryotes - 2964 (source: NCBI BLink)."
/db_xref="Araport:AT2G44980"
/db_xref="TAIR:AT2G44980"
intron_pos 75:1 (1/15)
intron_pos 105:1 (2/15)
intron_pos 156:0 (3/15)
intron_pos 200:0 (4/15)
intron_pos 260:1 (5/15)
intron_pos 305:2 (6/15)
intron_pos 345:0 (7/15)
intron_pos 375:0 (8/15)
intron_pos 411:0 (9/15)
intron_pos 478:0 (10/15)
intron_pos 520:0 (11/15)
intron_pos 728:2 (12/15)
intron_pos 777:1 (13/15)
intron_pos 832:1 (14/15)
intron_pos 870:2 (15/15)
BEGIN
1 MSKESSPPKV PSTTMEYERR LEAAAEIILE KEAKFSNTPP DCSEFGVTAT LKPHQVEGVS
61 WLIQKYLLGV NVVLELDQMG LGKTLQAISF LSYLKFRQGL PGPFLVLCPL SVTDGWVSEI
121 NRFTPNLEVL RYVGDKYCRL DMRKSMYDHV KKSSKGHFLP FDVLLTTYDI ALVDQDFLSQ
181 IPWQYAIIDE AQRLKNPNSV LYNVLLEQFL IPRRLLITGT PIQNNLTELW ALMHFCMPLV
241 FGTLDQFLSA FKETGDGLSG LDVSNDKETY KSLKFILGAF MLRRTKSLLI ESGNLVLPPL
301 TELTVMVPLV SLQKKIYTSI LRKELPGLLE LSSGGSNHTS LQNIVIQLRK ACSHPYLFPG
361 IEPEPFEEGE HLVQASGKLL VLDQLLKRLH DSGHRVLLFS QMTSTLDILQ DFMELRRYSY
421 ERLDGSVRAE ERFAAIKNFS AKTERGLDSE VDGSNAFVFM ISTRAGGVGL NLVAADTVIF
481 YEQDWNPQVD KQALQRAHRI GQISHVLSIN LVTEHSVEEV ILRRAERKLQ LSHNVVGDNM
541 EEKEEDGGDL RSLVFGLQRF DPEEIHNEES DNLKMVEISS LAEKVVAIRQ NVEPDKEERR
601 FEINSSDTLL GNTSSASLDS ELDEASYLSW VEKLKEAARS SKDEKIIELG NRKNLSEERN
661 LRIEAARKKA EEKKLATWGA HGYQSLSVEE PILPDDVDSS SDAGSVNFVF GDCTNPSTVS
721 HEPAIIFSCV DDSGNWGRGG MFDALSKLSN TVPTAYHRAS EFKDLHLGDL HLIKIDDNDD
781 QQNTQASKPL WVAVAVTQSY NSRRKVPRSS ISIPDLESCL AKASFSASQK SASLHMPRIG
841 YQDGSDRSQW YTVERLLRKY SSIFTVKIFV YYYRRSP
//