LOCUS AEC10489.1 878 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana histone mono-ubiquitination 1 protein.
ACCESSION CP002685-6960
PROTEIN_ID AEC10489.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HUB1"
/locus_tag="AT2G44950"
/gene_synonym="AT2G44960"
/gene_synonym="histone mono-ubiquitination 1"
/gene_synonym="RDO4"
/gene_synonym="REDUCED DORMANCY 4"
/gene_synonym="T14P1.25"
/gene_synonym="T14P1_25"
/inference="Similar to RNA sequence,
EST:INSD:N38243.1,INSD:EG479153.1,INSD:EL331227.1,
INSD:EG464887.1,INSD:EL154670.1,INSD:BG459574.1,
INSD:EG456083.1,INSD:BX839832.1,INSD:BX839352.1,
INSD:F15451.1,INSD:AV826732.1,INSD:EL121164.1,
INSD:EH866561.1,INSD:AV796150.1,INSD:ES139194.1,
INSD:EG523608.1,INSD:F15450.1,INSD:EL263284.1,
INSD:EG456082.1,INSD:EL195520.1,INSD:EG523607.1,
INSD:EG464888.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010360.1,INSD:BX842475.1,INSD:AY081322.1"
/note="histone mono-ubiquitination 1 (HUB1); FUNCTIONS IN:
ubiquitin-protein ligase activity, protein
homodimerization activity, zinc ion binding; INVOLVED IN:
in 10 processes; LOCATED IN: mitochondrion, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type, conserved site (InterPro:IPR017907), Zinc
finger, RING-type (InterPro:IPR001841); BEST Arabidopsis
thaliana protein match is: histone mono-ubiquitination 2
(TAIR:AT1G55250.1); Has 39567 Blast hits to 24086 proteins
in 1905 species: Archae - 719; Bacteria - 4806; Metazoa -
20260; Fungi - 3821; Plants - 2415; Viruses - 125; Other
Eukaryotes - 7421 (source: NCBI BLink)."
/db_xref="Araport:AT2G44950"
/db_xref="TAIR:AT2G44950"
intron_pos 40:0 (1/18)
intron_pos 94:0 (2/18)
intron_pos 120:1 (3/18)
intron_pos 196:1 (4/18)
intron_pos 250:1 (5/18)
intron_pos 315:0 (6/18)
intron_pos 343:0 (7/18)
intron_pos 383:0 (8/18)
intron_pos 445:1 (9/18)
intron_pos 499:0 (10/18)
intron_pos 523:0 (11/18)
intron_pos 548:2 (12/18)
intron_pos 613:2 (13/18)
intron_pos 638:0 (14/18)
intron_pos 667:0 (15/18)
intron_pos 713:0 (16/18)
intron_pos 780:2 (17/18)
intron_pos 836:0 (18/18)
BEGIN
1 MASTGEPDRK RRHFSSISPS EAAAAVKKQP FFWPSSEDKL DTAVLQFQNL KLSQKLEAQQ
61 VECSILEDKL SQIKEKQLPY NSSLKTVHKS WEKLTASVES CSVRVSDSSS GAHRFVNKED
121 GSSPAVKNDF INRLLETGAT ESSSSNICSN QMEENGVNTS SQMTQTLYNL VAATEDLRCL
181 KDELYPTVLR TNLGKDLCGQ LALSELESEI KSFRGDLDDV LVKFKSLSRE LQSHRDADAK
241 VRVDLKRIRG ELEDEVVELQ QCNGDLSALR AERDATAGAF FPVLSLGNKL ATSDRERDKQ
301 RDLQDMETVL KELTVLASGR LQQLKNLHEE RTKMLGKMSN LQNKSKSVRC ISSSQACLSL
361 KDQLEKSKEA VFQYMALLEK LQVEKDSIVW KEREINIKNE LGDVSRKTSA VTDSRMASLD
421 SEIQKQLDEK MRIKTRLGNI SRERGRKEIF ADMKALISSF PEEMSSMRSQ LNNYKETAGG
481 IHSLRADVQS LSGVLCRKTK EYEALQLRSA DYASQLGDLN ATVCDLKNSH EELKLFLDMY
541 KRESTDARDI AEAKEQEYRA WAHVQSLKSS LDEQNLELRV KAANEAEAVS QQMLAAAEAE
601 IADLRQKMDD CKRDVAKHSD ILKSKHEEHG TYLSEIQTIG SAYEDIVPQN QQLLLQVTER
661 DDYNIKLFLE GITSRQMQDT LLIDKYIMDK DIQQGSAYAS FLSKKSSRIE DQLRFCTDQF
721 QKLAEDKYQK SVSLENLQKK RADIGNGLEQ ARSRLEESHS KVEQSRLDYG ALELELEIER
781 FNRRRIEEEM EIAKKKVSRL RSLIEGSSAI QKLRQELSEF KEILKCKACN DRPKEVVITK
841 CYHLFCNPCV QKLTGTRQKK CPTCSASFGP NDIKPIYI
//