LOCUS AEC10479.1 555 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR-like)
superfamily protein protein.
ACCESSION CP002685-6949
PROTEIN_ID AEC10479.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="AHG11"
/locus_tag="AT2G44880"
/gene_synonym="ABA hypersensitive germination 11"
/gene_synonym="T13E15.11"
/inference="similar to RNA sequence, mRNA:INSD:DQ446623.1"
/note="Pentatricopeptide repeat (PPR-like) superfamily
protein; INVOLVED IN: biological_process unknown; LOCATED
IN: endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1);
Has 36784 Blast hits to 13843 proteins in 210 species:
Archae - 0; Bacteria - 9; Metazoa - 10; Fungi - 56; Plants
- 36313; Viruses - 0; Other Eukaryotes - 396 (source: NCBI
BLink)."
/db_xref="Araport:AT2G44880"
/db_xref="TAIR:AT2G44880"
BEGIN
1 MLRHAIETNV QIFTKFLVIS ASAVGIGYAR KLFDQRPQRD DSFLSNSMIK AYLETRQYPD
61 SFALYRDLRK ETCFAPDNFT FTTLTKSCSL SMCVYQGLQL HSQIWRFGFC ADMYVSTGVV
121 DMYAKFGKMG CARNAFDEMP HRSEVSWTAL ISGYIRCGEL DLASKLFDQM PHVKDVVIYN
181 AMMDGFVKSG DMTSARRLFD EMTHKTVITW TTMIHGYCNI KDIDAARKLF DAMPERNLVS
241 WNTMIGGYCQ NKQPQEGIRL FQEMQATTSL DPDDVTILSV LPAISDTGAL SLGEWCHCFV
301 QRKKLDKKVK VCTAILDMYS KCGEIEKAKR IFDEMPEKQV ASWNAMIHGY ALNGNARAAL
361 DLFVTMMIEE KPDEITMLAV ITACNHGGLV EEGRKWFHVM REMGLNAKIE HYGCMVDLLG
421 RAGSLKEAED LITNMPFEPN GIILSSFLSA CGQYKDIERA ERILKKAVEL EPQNDGNYVL
481 LRNLYAADKR WDDFGMVKNV MRKNQAKKEV GCSLIEINYI VSEFISGDTT HPHRRSIHLV
541 LGDLLMHMNE EKYNW
//