LOCUS AEC10466.1 266 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ELMO/CED-12 family protein protein.
ACCESSION CP002685-6927
PROTEIN_ID AEC10466.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G44770"
/gene_synonym="F16B22.26"
/inference="Similar to RNA sequence,
EST:INSD:CB262974.1,INSD:EL335037.1,INSD:ES125022.1,
INSD:DR225527.1,INSD:AV440779.1,INSD:EH900873.1,
INSD:BP788662.1,INSD:BP617645.1,INSD:EL104829.1,
INSD:BP599630.1,INSD:EL320747.1,INSD:DR225525.1,
INSD:BP591495.1,INSD:DR375867.1,INSD:DR225524.1,
INSD:BP857956.1,INSD:EG521535.1,INSD:AV827758.1,
INSD:EL339419.1,INSD:AV442361.1,INSD:DR225521.1,
INSD:EH809853.1,INSD:EL307011.1,INSD:ES142959.1,
INSD:AV799231.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820332.1,INSD:AF458341.1,INSD:BX819644.1,
INSD:BX820962.1,INSD:AY054275.1,INSD:AY087605.1,
INSD:BX820259.1"
/note="ELMO/CED-12 family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: phagocytosis;
LOCATED IN: cytoskeleton; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Engulfment/cell motility, ELMO
(InterPro:IPR006816); BEST Arabidopsis thaliana protein
match is: ELMO/CED-12 family protein (TAIR:AT3G60260.4);
Has 866 Blast hits to 866 proteins in 151 species: Archae
- 0; Bacteria - 0; Metazoa - 498; Fungi - 61; Plants -
182; Viruses - 0; Other Eukaryotes - 125 (source: NCBI
BLink)."
/db_xref="Araport:AT2G44770"
/db_xref="TAIR:AT2G44770"
intron_pos 29:1 (1/8)
intron_pos 66:0 (2/8)
intron_pos 89:0 (3/8)
intron_pos 127:2 (4/8)
intron_pos 146:0 (5/8)
intron_pos 186:1 (6/8)
intron_pos 202:1 (7/8)
intron_pos 234:0 (8/8)
BEGIN
1 MDDREGSFVA VRRISQGLER GSVYNSSSAE AVPGSAAWLG RGLSCVCAQR RDSDANSTFD
61 LTPAQEECLQ SLQNRIDVAY DSTIPLHQEA LRELWKLSFP EEELHGLISE QWKEMGWQGK
121 DPSTDFRGGG FISLENLLYF ARNFQKSFQD LLRKQVGDRS VWEYPFAVAG INLTFMLIQM
181 LDLEAVKPRT IVGATFLKFL SENESAFDLL YCIAFKLMDQ QWLSMRASYM EFNTVMKSTR
241 RQLERELMLE DIMHLEDLPS YALLNQ
//