LOCUS AEC10439.1 492 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana glycosyl hydrolase 9B12 protein.
ACCESSION CP002685-6894
PROTEIN_ID AEC10439.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="GH9B12"
/locus_tag="AT2G44570"
/gene_synonym="AtGH9B12"
/gene_synonym="F16B22.6"
/gene_synonym="glycosyl hydrolase 9B12"
/inference="Similar to RNA sequence,
EST:INSD:BP613100.1,INSD:EL105240.1,INSD:AU228834.1,
INSD:AU237746.1"
/note="glycosyl hydrolase 9B12 (GH9B12); FUNCTIONS IN:
hydrolase activity, hydrolyzing O-glycosyl compounds,
catalytic activity; INVOLVED IN: carbohydrate metabolic
process; LOCATED IN: endomembrane system; EXPRESSED IN:
male gametophyte, pollen tube; EXPRESSED DURING: L mature
pollen stage; CONTAINS InterPro DOMAIN/s: Six-hairpin
glycosidase (InterPro:IPR012341), Glycoside hydrolase,
family 9, active site (InterPro:IPR018221), Six-hairpin
glycosidase-like (InterPro:IPR008928), Glycoside
hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis
thaliana protein match is: glycosyl hydrolase 9B9
(TAIR:AT2G44540.1); Has 1880 Blast hits to 1860 proteins
in 272 species: Archae - 2; Bacteria - 716; Metazoa - 181;
Fungi - 17; Plants - 918; Viruses - 0; Other Eukaryotes -
46 (source: NCBI BLink)."
/db_xref="Araport:AT2G44570"
/db_xref="TAIR:AT2G44570"
intron_pos 75:0 (1/3)
intron_pos 293:0 (2/3)
intron_pos 388:0 (3/3)
BEGIN
1 MSCISSQCFI TIKSICIVLL LSITCGAVSA NSNYGEALTK SLLYFEAQRS GKLPLDQRVI
61 WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFTTTM LAWSSVEMES QLKAHQEHGN
121 TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL
181 AGETAAAMAA ASLAFAPSDS AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY
241 EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301 NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL
361 EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS YMVGYGTNYP KRPHHRGASI
421 VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT
481 VAPLLGVLAA IA
//