LOCUS AEC10417.1 413 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-6865
PROTEIN_ID AEC10417.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G44410"
/gene_synonym="F4I1.22"
/inference="Similar to RNA sequence,
EST:INSD:BE521116.1,INSD:AV805586.1,INSD:ES187557.1,
INSD:ES051195.1,INSD:EH836182.1,INSD:AV806828.1,
INSD:BP639072.1,INSD:EL994677.1,INSD:AA597725.1,
INSD:ES130299.1,INSD:BP807033.1,INSD:BP660417.1,
INSD:DR362269.1,INSD:BP791958.1,INSD:BP639285.1,
INSD:DR362271.1,INSD:DR749513.1,INSD:ES145876.1,
INSD:AA598161.1,INSD:AV803055.1,INSD:EL025244.1,
INSD:DR362272.1,INSD:H37336.1,INSD:EL021602.1,
INSD:BP657922.1,INSD:AV795545.1,INSD:BE521117.1,
INSD:BP826007.1,INSD:BP633922.1,INSD:ES085792.1,
INSD:EL263648.1,INSD:EL066545.1,INSD:AA651300.1,
INSD:BP789860.1,INSD:EL250997.1,INSD:ES004024.1,
INSD:BP638383.1,INSD:BP820784.1,INSD:EH982446.1,
INSD:CB256053.1,INSD:DR749514.1,INSD:AV826568.1,
INSD:DR362270.1,INSD:BP827066.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820038.1,INSD:BX819073.1,INSD:BT012267.1,
INSD:BX819894.1,INSD:BT011628.1,INSD:BX819267.1,
INSD:BX819261.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: cultured cell; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT3G58030.4); Has 1419 Blast hits to 1419 proteins
in 219 species: Archae - 0; Bacteria - 0; Metazoa - 641;
Fungi - 147; Plants - 430; Viruses - 10; Other Eukaryotes
- 191 (source: NCBI BLink)."
/db_xref="Araport:AT2G44410"
/db_xref="TAIR:AT2G44410"
BEGIN
1 MSTSVQGETM DLDLNQEPSS DSESPGGLMT ALSPMLEELE SAQERIQERI RQLEVIVSRI
61 REREITTTTT PALVSPNEHR DSTAGVIHER SRERLVENGE NKTYLIAKAL NMEKTSSVPG
121 GFFDCNICLE KAEDPILTCC GHLFCWGCFY QLPLIYLNIK ECPVCDGEVT DAEVIPIYGN
181 GDDCDGTKPK LEDCGISLPP RPNAKRVESV RQKIINRGNP FFPGHENEAI EHIRRTIDSI
241 GLQALAQGDE FGLTNIINNG GDNGGQQQQQ QHHHHHHPPF GPLRLLPPYA TFPGLLVDTS
301 DIPAPFDDDA FDVDSFVDTT SLRRNRRRPS PAVRASYQRN RSNNASQTIS FRLGSSASSA
361 PREFAVPSSS IMTRSQTVNP TEVVTSSTSA SSSRRRTEDV NNGPRTRSRR RLR
//