LOCUS AEC10407.1 142 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002685-6853
PROTEIN_ID AEC10407.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G44310"
/gene_synonym="F4I1.12"
/inference="Similar to RNA sequence,
EST:INSD:DR313842.1,INSD:DR313850.1,INSD:DR313833.1,
INSD:DR313839.1,INSD:EL064636.1,INSD:DR313805.1,
INSD:EL187662.1,INSD:DR225860.1,INSD:DR313838.1,
INSD:BP576769.1,INSD:BP669125.1,INSD:ES011020.1,
INSD:DR313786.1,INSD:DR313837.1,INSD:AV825156.1,
INSD:DR313774.1,INSD:DR313844.1,INSD:DR313825.1,
INSD:EL021747.1,INSD:DR313831.1,INSD:DR313791.1,
INSD:EL297133.1,INSD:DR313800.1,INSD:EL219022.1,
INSD:DR313809.1,INSD:DR313798.1,INSD:EL217796.1,
INSD:DR313817.1,INSD:DR313815.1,INSD:EH850387.1,
INSD:AV790269.1,INSD:DR313841.1,INSD:DR313780.1,
INSD:DR313832.1,INSD:EL066631.1,INSD:CA781395.1,
INSD:DR313819.1,INSD:EL085928.1,INSD:DR313794.1,
INSD:DR313782.1,INSD:DR313823.1,INSD:DR313827.1,
INSD:DR313788.1,INSD:DR313801.1,INSD:DR313848.1,
INSD:ES081194.1,INSD:DR313789.1,INSD:EL112926.1,
INSD:DR313814.1,INSD:DR313822.1,INSD:BP818904.1,
INSD:DR225859.1,INSD:DR313849.1,INSD:DR313855.1,
INSD:EL262743.1,INSD:AI995801.1,INSD:DR313797.1,
INSD:ES178444.1,INSD:DR313830.1,INSD:BP855943.1,
INSD:EH880256.1,INSD:DR313845.1,INSD:DR313806.1,
INSD:DR313834.1,INSD:DR313790.1,INSD:DR313840.1,
INSD:EH933010.1,INSD:Z17518.1,INSD:DR313808.1,
INSD:CB258334.1,INSD:EH945238.1,INSD:DR313807.1,
INSD:DR313843.1,INSD:DR313813.1,INSD:ES062674.1,
INSD:EH830702.1,INSD:EL012858.1,INSD:DR313853.1,
INSD:DR313777.1,INSD:DR313810.1,INSD:DR313804.1,
INSD:EL175762.1,INSD:DR313779.1,INSD:EL318534.1,
INSD:BP563026.2,INSD:DR313776.1,INSD:DR313803.1,
INSD:DR313812.1,INSD:ES078225.1,INSD:DR313835.1,
INSD:EL138178.1,INSD:CB257557.1,INSD:EL302943.1,
INSD:EL212815.1,INSD:BP836551.1,INSD:DR313824.1,
INSD:DR313785.1,INSD:DR313784.1,INSD:BP644073.1,
INSD:DR313851.1,INSD:EL139826.1,INSD:DR313796.1,
INSD:EH982899.1,INSD:DR313846.1,INSD:DR313793.1,
INSD:EL070609.1,INSD:EL016829.1,INSD:DR313775.1,
INSD:DR313828.1,INSD:EH855692.1,INSD:EL109777.1,
INSD:DR313787.1,INSD:DR377717.1,INSD:EL163582.1,
INSD:DR313816.1,INSD:DR313783.1,INSD:DR313799.1,
INSD:BP631827.1,INSD:DR313792.1,INSD:DR374125.1,
INSD:F19884.1,INSD:DR313852.1,INSD:DR313854.1,
INSD:EL131218.1,INSD:BP644626.1,INSD:ES111081.1,
INSD:BP847921.1,INSD:BP657966.1,INSD:EL279601.1,
INSD:DR313773.1,INSD:DR313836.1,INSD:ES207998.1,
INSD:EL260008.1,INSD:DR313847.1,INSD:DR313802.1,
INSD:DR313826.1,INSD:EH916703.1,INSD:DR313781.1,
INSD:EL294690.1,INSD:DR313811.1,INSD:EL978490.1,
INSD:DR313778.1,INSD:EL023684.1,INSD:EL023582.1,
INSD:DR313795.1,INSD:EL263738.1,INSD:EH925815.1,
INSD:EL973239.1,INSD:ES036363.1,INSD:BP628140.1,
INSD:DR313820.1,INSD:EL172480.1,INSD:DR313818.1,
INSD:ES010951.1,INSD:DR313829.1,INSD:DR313821.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY086670.1,INSD:AY072372.1,INSD:AY114617.1,
INSD:BX821177.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1,
calcium-binding site (InterPro:IPR018247), EF-HAND 2
(InterPro:IPR018249), EF-hand-like domain
(InterPro:IPR011992), Calcium-binding EF-hand
(InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST
Arabidopsis thaliana protein match is: Calcium-binding EF
hand family protein (TAIR:AT1G54530.1); Has 278 Blast hits
to 269 proteins in 34 species: Archae - 0; Bacteria - 3;
Metazoa - 2; Fungi - 2; Plants - 243; Viruses - 0; Other
Eukaryotes - 28 (source: NCBI BLink)."
/db_xref="Araport:AT2G44310"
/db_xref="TAIR:AT2G44310"
BEGIN
1 MGVVLIDGST VRSFVDDEEQ FKKSVDERFA ALDLNKDGVL SRSELRKAFE SMRLLESHFG
61 VDVVTPQDEL TNLYDSIFEK FDTDQSGSVD LEEFRSEMKK IVLAIADGLG SCPITMVLDD
121 DDDNFLKKAA DLEASKLEKA SS
//