LOCUS       AEC10396.1               409 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana tRNA-splicing ligase, putative (DUF239)
            protein.
ACCESSION   CP002685-6842
PROTEIN_ID  AEC10396.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G44250"
                     /gene_synonym="F4I1.6"
                     /inference="Similar to RNA sequence, EST:INSD:AV556750.1"
                     /note="Protein of Unknown Function (DUF239); FUNCTIONS IN:
                     molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: endomembrane
                     system; CONTAINS InterPro DOMAIN/s: Protein of unknown
                     function DUF239, plant (InterPro:IPR004314); BEST
                     Arabidopsis thaliana protein match is: Protein of Unknown
                     Function (DUF239) (TAIR:AT2G44210.1); Has 35333 Blast hits
                     to 34131 proteins in 2444 species: Archae - 798; Bacteria
                     - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
                     - 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G44250"
                     /db_xref="TAIR:AT2G44250"
     intron_pos      55:0 (1/6)
     intron_pos      84:0 (2/6)
     intron_pos      162:0 (3/6)
     intron_pos      216:0 (4/6)
     intron_pos      234:0 (5/6)
     intron_pos      283:0 (6/6)
BEGIN
        1 MMLNQTVIFF LLWVIIALVV EITLAGKITV SDIHEQKIEQ RLNQLNKPAV KSIHSPDGDI
       61 IDCVWIYHQP AFDHPLLKNH TIQMRPKSDS TRDKTGGNKT DIIHQLWRTK GECPKNTIPI
      121 RRRTRDDLLR SDSIKTHGRK NPPTISPTTY HLPDDQTEVH EHASVYLDYG EYHGSKSRIS
      181 IWRPDVNMTE FSLAQTWVVG GDWDTVLNTV ESGWQILHSM YGDNNTRLFA FWTSDSYGDN
      241 SCYNLDCPGF VQVNKDIALG AALNTISTYN GNQYDFLLTI EKEQDTGLWW LKFDTHLVGY
      301 WPSFLVPKLA DSARMIAWGG EIVYDASGQN EHTLTQMGSG HFAEEGFKKA AYINNIEYID
      361 KSNHPIKPFP QNLEASVTRP ECYNLKVGSS RRWGTYIFYG GPGRNPQCL
//