LOCUS AEC10387.1 474 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ENDOSPERM DEFECTIVE protein (DUF566) protein.
ACCESSION CP002685-6833
PROTEIN_ID AEC10387.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="EDE1"
/locus_tag="AT2G44190"
/gene_synonym="EMB3116"
/gene_synonym="EMBRYO DEFECTIVE 3116"
/gene_synonym="ENDOSPERM DEFECTIVE 1"
/gene_synonym="F6E13.32"
/gene_synonym="QWRF domain containing 5"
/gene_synonym="QWRF5"
/inference="Similar to RNA sequence,
EST:INSD:AV556043.1,INSD:EL988998.1,INSD:AV562056.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX818775.1,INSD:BT022041.1"
/note="ENDOSPERM DEFECTIVE 1 (EDE1); CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF566
(InterPro:IPR007573); BEST Arabidopsis thaliana protein
match is: Family of unknown function (DUF566)
(TAIR:AT3G60000.2); Has 456 Blast hits to 444 proteins in
94 species: Archae - 0; Bacteria - 6; Metazoa - 141; Fungi
- 55; Plants - 202; Viruses - 3; Other Eukaryotes - 49
(source: NCBI BLink)."
/db_xref="Araport:AT2G44190"
/db_xref="TAIR:AT2G44190"
intron_pos 304:0 (1/5)
intron_pos 344:0 (2/5)
intron_pos 383:0 (3/5)
intron_pos 413:0 (4/5)
intron_pos 449:0 (5/5)
BEGIN
1 MEARIGRSME HPSTPAINAP APVPPPSTRR PRVREVSSRF MSPISSSSSS SSSSSAGDLH
61 QLTSNSPRHH HQHQNQRSTS AQRMRRQLKM QEGDENRPSE TARSLDSPFP LQQVDGGKNP
121 KQHIRSKPLK ENGHRLDTPT TAMLPPPSRS RLNQQRLLTA SAATRLLRSS GISLSSSTDG
181 EEDNNNREIF KSNGPDLLPT IRTQAKAFNT PTASPLSRSL SSDDASMFRD VRASLSLKNG
241 VGLSLPPVAP NSKIQADTKK QKKALGQQAD VHSLKLLHNR YLQWRFANAN AEVKTQSQKA
301 QAERMFYSLG LKMSELSDSV QRKRIELQHL QRVKAVTEIV ESQTPSLEQW AVLEDEFSTS
361 LLETTEALLN ASLRLPLDSK IKVETKELAE ALVVASKSME GIVQNIGNLV PKTQEMETLM
421 SELARVSGIE KASVEDCRVA LLKTHSSQME ECYLRSQLIQ HQKKCHQQEC TTSV
//