LOCUS AEC10342.1 1316 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Endonuclease/exonuclease/phosphatase
family protein protein.
ACCESSION CP002685-6776
PROTEIN_ID AEC10342.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="5PTase12"
/locus_tag="AT2G43900"
/gene_synonym="F6E13.3"
/gene_synonym="inositol-polyphosphate 5-phosphatase 12"
/inference="Similar to RNA sequence,
EST:INSD:AV785870.1,INSD:EH975168.1,INSD:EL306267.1,
INSD:ES036208.1,INSD:EH948051.1,INSD:BX839129.1,
INSD:EL219463.1,INSD:EH867586.1,INSD:AV824367.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY080628.1,INSD:AY761187.1"
/note="Endonuclease/exonuclease/phosphatase family
protein; FUNCTIONS IN: inositol-polyphosphate
5-phosphatase activity, inositol or phosphatidylinositol
phosphatase activity; INVOLVED IN: biological_process
unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex;
EXPRESSED IN: sperm cell, male gametophyte, flower,
cultured cell, pollen tube; EXPRESSED DURING: L mature
pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing
domain (InterPro:IPR011046), Inositol polyphosphate
related phosphatase (InterPro:IPR000300), WD40/YVTN
repeat-like-containing domain (InterPro:IPR015943), WD40
repeat (InterPro:IPR001680),
Endonuclease/exonuclease/phosphatase (InterPro:IPR005135);
BEST Arabidopsis thaliana protein match is:
Endonuclease/exonuclease/phosphatase family protein
(TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins
in 490 species: Archae - 18; Bacteria - 518; Metazoa -
2458; Fungi - 805; Plants - 729; Viruses - 32; Other
Eukaryotes - 3504 (source: NCBI BLink)."
/db_xref="Araport:AT2G43900"
/db_xref="TAIR:AT2G43900"
intron_pos 278:1 (1/10)
intron_pos 362:2 (2/10)
intron_pos 632:0 (3/10)
intron_pos 674:2 (4/10)
intron_pos 703:0 (5/10)
intron_pos 758:1 (6/10)
intron_pos 772:0 (7/10)
intron_pos 861:1 (8/10)
intron_pos 902:2 (9/10)
intron_pos 1023:0 (10/10)
BEGIN
1 MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK
61 ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD SDDYLHQPEI GEDFQPLPEF
121 VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV
181 RFWNFDDAFE PGCGLSGRVQ RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR
241 SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
301 LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS
361 LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA KIASTSKKEK PHGFLQRSRN
421 AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR
481 HHQCAVLCFC TFGERIYIGY VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT
541 HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
601 SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER
661 MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG NKGGVGLRIR VFDRIMCFIN
721 CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET
781 KQDLAEADMV VFFGDFNYRL FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR
841 EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
901 MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET
961 IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV REDEDTLELH PLGSFGFPRW
1021 LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS
1081 TETVCHRVHV RHCFSAKNLR IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS
1141 DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201 DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS
1261 DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN SNSSTVEESR NNHNKR
//