LOCUS       AEC10341.1               392 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Pectin lyase-like superfamily protein protein.
ACCESSION   CP002685-6775
PROTEIN_ID  AEC10341.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G43890"
                     /gene_synonym="F6E13.2"
                     /inference="similar to RNA sequence, mRNA:INSD:DQ056578.1"
                     /note="Pectin lyase-like superfamily protein; FUNCTIONS
                     IN: polygalacturonase activity; INVOLVED IN: carbohydrate
                     metabolic process; LOCATED IN: endomembrane system;
                     EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin
                     lyase fold/virulence factor (InterPro:IPR011050), Pectin
                     lyase fold (InterPro:IPR012334), Glycoside hydrolase,
                     family 28 (InterPro:IPR000743), Parallel beta-helix repeat
                     (InterPro:IPR006626); BEST Arabidopsis thaliana protein
                     match is: Pectin lyase-like superfamily protein
                     (TAIR:AT1G05650.1); Has 3985 Blast hits to 3965 proteins
                     in 478 species: Archae - 4; Bacteria - 1086; Metazoa - 14;
                     Fungi - 1267; Plants - 1489; Viruses - 0; Other Eukaryotes
                     - 125 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G43890"
                     /db_xref="TAIR:AT2G43890"
     intron_pos      148:0 (1/3)
     intron_pos      244:2 (2/3)
     intron_pos      321:0 (3/3)
BEGIN
        1 MDNNKLVAVL LMFFSSFLLM KSSTAASNYN VVSFGAKPDG RTDSTKAFLG AWQAACRSAA
       61 AVTVTVPRGS FLLKPVEFRG PCRSRITFQI YGTIVAPSDY RGLGNSGYWI LFVKVNRISI
      121 IGGTLDARGA SFWACRKSGK SCPVGARSMT FNWANDVVVS GLTSINSQTT HLVINSCNNV
      181 IVRKVKLVAP DQSPNTDGLH VQGSAGVTVT DGTFHTGDDC ISIGPGTRNL YMSKLNCGPG
      241 HGISIGSLGR DANEAGVENI TLINSVFSGS DNGVRIKTWA RQSTGFVRNV LFQNLIMKNV
      301 QNPIIVDQNY CPSNQGCPKQ GSGVKISQVV YRNIQGTSRT QQALTFDCSR SNPCQAIRLH
      361 DIKLTFNGRS ATSTCKNIKG VKAGVVMPQG CL
//