LOCUS AEC10310.1 401 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Plant stearoyl-acyl-carrier-protein
desaturase family protein protein.
ACCESSION CP002685-6739
PROTEIN_ID AEC10310.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SSI2"
/locus_tag="AT2G43710"
/gene_synonym="AtSSI2"
/gene_synonym="F18O19.18"
/gene_synonym="FAB2"
/gene_synonym="FATTY ACID BIOSYNTHESIS 2"
/gene_synonym="LDW1"
/gene_synonym="lesion dwarf mimic 1"
/gene_synonym="suppressor of SA insensitive 2"
/inference="Similar to RNA sequence,
EST:INSD:EL224536.1,INSD:AA650931.1,INSD:EH819498.1,
INSD:BP579242.1,INSD:H36755.1,INSD:AV518549.1,
INSD:EH933805.1,INSD:EL297018.1,INSD:BP860775.1,
INSD:EH968400.1,INSD:AV554359.1,INSD:BP563667.1,
INSD:AV565522.1,INSD:EL157782.1,INSD:EL250956.1,
INSD:EL084060.1,INSD:AI995852.1,INSD:EH930084.1,
INSD:BP618515.1,INSD:EH927647.1,INSD:EL330038.1,
INSD:ES166534.1,INSD:EH955124.1,INSD:AV809375.1,
INSD:EL304285.1,INSD:EL993412.1,INSD:BP600535.1,
INSD:EL234870.1,INSD:AV558691.1,INSD:AV519477.1,
INSD:EL202579.1,INSD:DR348819.1,INSD:EH859283.1,
INSD:AV790582.1,INSD:BP583614.1,INSD:BP612338.1,
INSD:EH944991.1,INSD:AV785825.1,INSD:EL112597.1,
INSD:AV536657.1,INSD:BP599944.1,INSD:EH805692.1,
INSD:EL032677.1,INSD:EH804707.1,INSD:DR381100.1,
INSD:BP577762.1,INSD:AV787240.1,INSD:EH940077.1,
INSD:EL041535.1,INSD:EH845592.1,INSD:AV545595.1,
INSD:BP851747.1,INSD:EL028865.1,INSD:EL204788.1,
INSD:AV524376.1,INSD:EH931054.1,INSD:AV818745.1,
INSD:EH913170.1,INSD:EL252621.1,INSD:BP572180.1,
INSD:EH821819.1,INSD:BE530822.1,INSD:EH966267.1,
INSD:T88330.1,INSD:H36753.1,INSD:EL060941.1,
INSD:AV797169.1,INSD:BP604203.1,INSD:BP595897.1,
INSD:EL139662.1,INSD:EH982556.1,INSD:EL000970.1,
INSD:BP590041.1,INSD:EL270497.1,INSD:EH896739.1,
INSD:AV799613.1,INSD:AV525694.1,INSD:EH949673.1,
INSD:ES066350.1,INSD:EL039190.1,INSD:BP583804.1,
INSD:EL991608.1,INSD:EL043864.1,INSD:AV817640.1,
INSD:EH909528.1,INSD:EL098678.1,INSD:EL180165.1,
INSD:BE523710.1,INSD:ES087813.1,INSD:EH843183.1,
INSD:EH872423.1,INSD:EL334571.1,INSD:EL060623.1,
INSD:EL002643.1,INSD:BP592747.1,INSD:EL064504.1,
INSD:BE521453.1,INSD:EG503861.1,INSD:EH983977.1,
INSD:EL103202.1,INSD:ES012460.1,INSD:EL083579.1,
INSD:BP566180.1,INSD:BP566713.1,INSD:EL099035.1,
INSD:AV783981.1,INSD:BE526070.1,INSD:AV789223.1,
INSD:EL013421.1,INSD:EH799716.1,INSD:EH878099.1,
INSD:EL204336.1,INSD:BE520321.1,INSD:EL264299.1,
INSD:EH915075.1,INSD:EH932773.1,INSD:EL230124.1,
INSD:BP573854.1,INSD:BP616202.1,INSD:BP589923.1,
INSD:EH968720.1,INSD:EL305599.1,INSD:BP571853.1,
INSD:EL228599.1,INSD:EL013482.1,INSD:DR228815.1,
INSD:EL146855.1,INSD:BP566298.1,INSD:EL078488.1,
INSD:EH870210.1,INSD:BP571308.1,INSD:EL335350.1,
INSD:EL199170.1,INSD:BP587208.1,INSD:AV562958.1,
INSD:BP568340.1,INSD:EL316746.1,INSD:EL098284.1,
INSD:EL257376.1,INSD:BP576115.1,INSD:BP593260.1,
INSD:AV800572.1,INSD:AV553281.1,INSD:EH966793.1,
INSD:BP594953.1,INSD:EL256563.1,INSD:AV801139.1,
INSD:BE525147.1,INSD:EH845044.1"
/inference="similar to RNA sequence, mRNA:INSD:AK230443.1"
/note="SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein]
desaturase activity, stearoyl-CoA 9-desaturase activity;
INVOLVED IN: in 10 processes; LOCATED IN: chloroplast,
plastid; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Ribonucleotide reductase-related (InterPro:IPR012348),
Ferritin/ribonucleotide reductase-like
(InterPro:IPR009078), Fatty acid desaturase, type 2
(InterPro:IPR005067), Stearoyl-ACP desaturase, conserved
site (InterPro:IPR005803); BEST Arabidopsis thaliana
protein match is: Plant stearoyl-acyl-carrier-protein
desaturase family protein (TAIR:AT3G02630.1); Has 946
Blast hits to 938 proteins in 221 species: Archae - 0;
Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450;
Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink)."
/db_xref="Araport:AT2G43710"
/db_xref="TAIR:AT2G43710"
intron_pos 49:0 (1/2)
intron_pos 216:0 (2/2)
BEGIN
1 MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR
61 EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW QPQDFLPDPA SDGFEDQVRE
121 LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE
181 ENRHGDLLNK YLYLSGRVDM RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS
241 HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301 ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK
361 AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ L
//