LOCUS AEC10295.1 281 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Chitinase family protein protein.
ACCESSION CP002685-6716
PROTEIN_ID AEC10295.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43610"
/gene_synonym="F18O19.28"
/inference="Similar to RNA sequence,
EST:INSD:EH958410.1,INSD:EH939109.1,INSD:R89996.1,
INSD:EL190476.1,INSD:H76050.1,INSD:AV820245.1,
INSD:EL189573.1,INSD:AI100140.1,INSD:DR368222.1,
INSD:EH933433.1,INSD:CK119649.1,INSD:AV788809.1,
INSD:AI994957.1,INSD:AV832269.1,INSD:N65447.1,
INSD:AV817395.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY114724.1,INSD:AY072357.1"
/note="Chitinase family protein; FUNCTIONS IN: chitin
binding, chitinase activity; INVOLVED IN: carbohydrate
metabolic process, cell wall macromolecule catabolic
process; LOCATED IN: plasma membrane; EXPRESSED IN: 15
plant structures; EXPRESSED DURING: 7 growth stages;
CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1,
conserved site (InterPro:IPR018371), Glycoside hydrolase,
family 19 (InterPro:IPR016283), Chitin-binding, type 1
(InterPro:IPR001002), Glycoside hydrolase, family 19,
catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana
protein match is: Chitinase family protein
(TAIR:AT2G43620.1); Has 3095 Blast hits to 2792 proteins
in 589 species: Archae - 0; Bacteria - 708; Metazoa - 34;
Fungi - 309; Plants - 1802; Viruses - 51; Other Eukaryotes
- 191 (source: NCBI BLink)."
/db_xref="Araport:AT2G43610"
/db_xref="TAIR:AT2G43610"
intron_pos 151:1 (1/1)
BEGIN
1 MATQNAILKK ALIIFLFTLT IMTGTAFSQN CGTNGCKGNM CCSRWGYCGT TKAYCGTGCQ
61 SGPCNSKPKP TPTPSGSGGL NAGPRGTIAS VITPAFFNSI MSKVGSGCPA KGFYTRQAFI
121 AAAESFAAYK GTVAKREIAA MLAQFSHESG SFCYKEEIAR GRYCSPSTTY PCQPGKNYYG
181 RGPIQITWNY NYGAAGKFLG LPLLKDPDMV ARSPTVAFQC AMWFWNKNVR PVLSQGFGAT
241 TRRINGGECN GGRPAAVQSR VNHYLDFCKK LGVTPGTNLS C
//