LOCUS AEC10291.1 277 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana chitinase protein.
ACCESSION CP002685-6711
PROTEIN_ID AEC10291.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="CHI"
/locus_tag="AT2G43570"
/gene_synonym="''chitinase"
/gene_synonym="chitinase"
/gene_synonym="F18O19.32"
/gene_synonym="putative"
/gene_synonym="putative''"
/inference="Similar to RNA sequence,
EST:INSD:BP860152.1,INSD:BP664662.1,INSD:CB185635.1,
INSD:AV564777.1,INSD:BP617948.1,INSD:EG496450.1,
INSD:BP655768.1,INSD:BP668113.1,INSD:CB185694.2,
INSD:BP634793.1,INSD:AV817644.1,INSD:AV819641.1,
INSD:CB263472.1,INSD:BP626649.1,INSD:CB185903.1,
INSD:BP830408.1,INSD:AV798828.1,INSD:EG496449.1,
INSD:EG510676.1,INSD:AV820924.1,INSD:BP842792.1,
INSD:AV821490.1,INSD:AV831751.1,INSD:AI997744.1,
INSD:AV813183.1,INSD:AV781964.1,INSD:BP638016.1,
INSD:CB185783.2"
/inference="similar to RNA sequence,
mRNA:INSD:AY099810.2,INSD:BX821477.1,INSD:BT003417.1,
INSD:AK226201.1,INSD:BX819756.1"
/note="''chitinase, putative'' (CHI); FUNCTIONS IN: chitin
binding, chitinase activity; INVOLVED IN: carbohydrate
metabolic process, cell wall macromolecule catabolic
process; LOCATED IN: apoplast, plant-type cell wall;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding,
type 1, conserved site (InterPro:IPR018371), Glycoside
hydrolase, family 19 (InterPro:IPR016283), Chitin-binding,
type 1 (InterPro:IPR001002), Glycoside hydrolase, family
19, catalytic (InterPro:IPR000726); BEST Arabidopsis
thaliana protein match is: Chitinase family protein
(TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins
in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35;
Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes
- 124 (source: NCBI BLink)."
/db_xref="Araport:AT2G43570"
/db_xref="TAIR:AT2G43570"
intron_pos 139:1 (1/1)
BEGIN
1 MAKPTSRNDR FALFFITLIF LILTVSKPVA SQNCGCASDF CCSKYGYCGT TDEFCGEGCQ
61 AGPCRSSGGG GDPAVSLEGT VTPDFFNSIL NQRGDCPGKG FYTHDTFMAA ANSYPSFGAS
121 ISKREIAAFF AHVAQETGFM CYIEEIDGPA KAASGEYCDT EKPEFPCAQG KGYYGRGAIQ
181 LSWNYNYGLC GKALDENLLA SPEKVAQDQV LAFKTAFWFW TTNVRTSFKS GFGATIRAVN
241 SRECSGGDST AKAANRIKYF QDYCGKLGVA PGDNLTC
//