LOCUS AEC10278.1 745 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002685-6690
PROTEIN_ID AEC10278.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43490"
/gene_synonym="T1O24.23"
/inference="Similar to RNA sequence,
EST:INSD:EG509622.1,INSD:EG442116.1,INSD:EL987581.1,
INSD:EL340948.1,INSD:EG442110.1,INSD:EL127972.1,
INSD:EH848484.1,INSD:EG442115.1,INSD:EG442114.1,
INSD:EG509621.1,INSD:EL132200.1,INSD:EL069602.1,
INSD:EG442113.1,INSD:EG442111.1,INSD:EG442103.1,
INSD:EG442108.1,INSD:EG442101.1,INSD:EG442106.1,
INSD:EG442123.1,INSD:EL977943.1,INSD:EL337189.1"
/inference="similar to RNA sequence, mRNA:INSD:AY429354.1"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC
(InterPro:IPR000195); BEST Arabidopsis thaliana protein
match is: Ypt/Rab-GAP domain of gyp1p superfamily protein
(TAIR:AT3G59570.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G43490"
/db_xref="TAIR:AT2G43490"
intron_pos 46:0 (1/9)
intron_pos 79:0 (2/9)
intron_pos 113:2 (3/9)
intron_pos 363:1 (4/9)
intron_pos 404:1 (5/9)
intron_pos 434:0 (6/9)
intron_pos 501:0 (7/9)
intron_pos 661:0 (8/9)
intron_pos 689:0 (9/9)
BEGIN
1 MCSGGEGKQW SCGKAGVVSL QKVGSLVRDL SEPCLSQSRI QVVITIGKML KPEKWQASFD
61 SDGRVSGFQK ALKLIILGGI DPSIRAEVWE FLLGCYALSS TSEYRNQLRV ARRKRYNDLL
121 KQCQTMHSSV GTGSLAYVVG SKVMDMRKSY RDEAVKVATT DENREDAFID NNDNANTENH
181 HSDWSNNGTD TSHLHRRGSS SESVDLVSGR ESPESVVYNT SSFVSASSPY GYASPDGYFD
241 FPSLPVTDLF GRNSLDKIEV STPDEDASLK SELRSEDEGM HNFRIDKNAD LIREQRRSTP
301 EIKVMHSDSV GPSSYTGRNA EIVDGLRISD VPEMASVKDT PSRVGNVTED RVSEWLWTLH
361 RIVVDVVRTD SHLEFYEDPG NLGRMSDILA VYAWVDPATG YCQGMSDLVS PFVVLFEDNA
421 DAFWCFEMLI RRTRANFQME GPTGVMDQLQ SLWHILQITD KDIFSHLSRI GAESLHFAFR
481 MLLVLFRREL SFNEALRMWE MMWAADYDES VTETLENDCL EPLVIQLPRK SEPEVSEEMI
541 EDGIGNSTKR EPMISKSGPI SKSSGLLSRS GLLPKSGPLP KTAGPFSDES EIKSASSSYH
601 FCGLTRSLWS RNDRTTHVPC VVSSIKKGDD ALPVFCVAAI LIMNRHKIMK ETRSIDDMIQ
661 IFNDKVLVFR VRRCIRTAMK LRRKYMYKSQ VIKTKSHTQS QNLNQVHIQH QTHMESQRPE
721 EIQSHGENQS QTPSFHHSPA TQNGD
//