LOCUS AEC10273.1 388 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding ASCH domain protein protein.
ACCESSION CP002685-6676
PROTEIN_ID AEC10273.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43465"
/inference="Similar to RNA sequence,
EST:INSD:EG442048.1,INSD:EL201116.1,INSD:EH836777.1,
INSD:AU227073.1,INSD:EG442050.1,INSD:EG442046.1,
INSD:EG442034.1,INSD:EG442045.1,INSD:EG442049.1"
/note="RNA-binding ASCH domain protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; CONTAINS InterPro DOMAIN/s: ProFAR isomerase-like
(InterPro:IPR010759), ASCH domain (InterPro:IPR007374);
BEST Arabidopsis thaliana protein match is: RNA-binding
ASCH domain protein (TAIR:AT3G03320.1); Has 127 Blast hits
to 127 proteins in 42 species: Archae - 39; Bacteria - 18;
Metazoa - 2; Fungi - 4; Plants - 39; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink)."
/db_xref="Araport:AT2G43465"
/db_xref="TAIR:AT2G43465"
intron_pos 120:0 (1/9)
intron_pos 140:1 (2/9)
intron_pos 156:2 (3/9)
intron_pos 176:0 (4/9)
intron_pos 205:1 (5/9)
intron_pos 245:0 (6/9)
intron_pos 287:0 (7/9)
intron_pos 318:1 (8/9)
intron_pos 370:0 (9/9)
BEGIN
1 MIKIRDCLDE MVKFTLDYCV EFDIGLTGEF CSGLLCGESV LHDGERIESS SYALLHRFSG
61 VPDYPLYKVL ALGLLKSIDS GSFCGTFEKI SLGKEVIRLK EKEDEWSKLI NQKGSELVNA
121 LKDVFSELQV QEPLFSLMKD GIKTVEARCF EEEYDRIRRG GSMVMINKCL MFEVLELHQY
181 ASFYELLKAE SSEKVFPGTK TVEEGMQMFR KLYDTDQENF NGVVAIHLSK SVAQPCVALA
241 HILSGLSYTG VQNLLGLSHT TGSIFHALPP PRSMLLSSFM LPYKPKIKGC RLSHGARALA
301 KHVDRSSDGF WGVLQGTDSD KNERAMDIIN RFIGNCCWMN IHIVPPHGEV FEIRVAQGYG
361 ARWSRDGTKF IGFLEPYMED GHSMAWKH
//