LOCUS AEC10272.1 69 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal L38e protein family protein.
ACCESSION CP002685-6675
PROTEIN_ID AEC10272.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43460"
/gene_synonym="T1O24.20"
/inference="Similar to RNA sequence,
EST:INSD:ES119806.1,INSD:EL301650.1,INSD:BP655137.1,
INSD:BP847079.1,INSD:EL208977.1,INSD:ES014813.1,
INSD:EH970810.1,INSD:EL073891.1,INSD:EH909419.1,
INSD:ES164364.1,INSD:ES160172.1,INSD:EH799798.1,
INSD:BP822133.1,INSD:DR212058.1,INSD:EL248228.1,
INSD:ES187348.1,INSD:ES118838.1,INSD:CF773895.1,
INSD:T04606.1,INSD:EL279387.1,INSD:EL993802.1,
INSD:EL053856.1,INSD:ES180496.1,INSD:DR212038.1,
INSD:EH851036.1,INSD:EL183455.1,INSD:EL179034.1,
INSD:EL288660.1,INSD:AU227088.1,INSD:DR212042.1,
INSD:ES165306.1,INSD:ES024995.1,INSD:EL192068.1,
INSD:EH900816.1,INSD:EH957125.1,INSD:ES177275.1,
INSD:ES060094.1,INSD:EL244621.1,INSD:EH963105.1,
INSD:EH952956.1,INSD:BE039112.1,INSD:EH829420.1,
INSD:CB260354.1,INSD:DR212053.1,INSD:EL315154.1,
INSD:EL248596.1,INSD:EG459017.1,INSD:EH966405.1,
INSD:BP861823.1,INSD:ES207983.1,INSD:ES125024.1,
INSD:DR212057.1,INSD:DR212063.1,INSD:EL143302.1,
INSD:EH893378.1,INSD:ES052665.1,INSD:ES044974.1,
INSD:N96748.1,INSD:EL320366.1,INSD:ES016053.1,
INSD:BP831342.1,INSD:DR212071.1,INSD:DR212068.1,
INSD:DR212073.1,INSD:ES202289.1,INSD:BE038122.1,
INSD:DR212065.1,INSD:DR212070.1,INSD:EH989209.1,
INSD:EL004996.1,INSD:ES043741.1,INSD:EH938173.1,
INSD:BP856735.1,INSD:ES080454.1,INSD:EH869489.1,
INSD:DR212039.1,INSD:EG441621.1,INSD:ES195672.1,
INSD:ES021116.1,INSD:DR212048.1,INSD:DR212062.1,
INSD:EL076860.1,INSD:ES058111.1,INSD:ES185732.1,
INSD:EL981514.1,INSD:DR212074.1,INSD:DR212066.1,
INSD:DR212049.1,INSD:DR212050.1,INSD:DR212041.1,
INSD:DR212036.1,INSD:ES039100.1,INSD:EL283052.1,
INSD:EL252079.1,INSD:EH937545.1,INSD:EH888285.1,
INSD:ES049627.1,INSD:DR212031.1,INSD:EL226339.1,
INSD:AV531171.1,INSD:DR212043.1,INSD:EL009398.1,
INSD:ES055889.1,INSD:CB264925.1,INSD:BP853794.1,
INSD:EL976990.1,INSD:EH843770.1,INSD:EL228941.1,
INSD:ES067751.1,INSD:DR212032.1,INSD:BP630925.1,
INSD:EL212878.1,INSD:ES157543.1,INSD:ES167425.1,
INSD:DR212055.1,INSD:ES164749.1,INSD:ES137283.1,
INSD:ES123887.1,INSD:ES185814.1,INSD:DR212072.1,
INSD:EL279128.1,INSD:EL314442.1,INSD:EL146605.1,
INSD:EL015536.1,INSD:ES195012.1,INSD:DR212046.1,
INSD:DR212075.1,INSD:ES165156.1,INSD:ES079607.1,
INSD:BP838567.1,INSD:EH941396.1,INSD:EL249849.1,
INSD:DR212035.1,INSD:EL063438.1,INSD:DR212064.1,
INSD:ES043427.1,INSD:DR212034.1,INSD:DR212069.1,
INSD:Z29209.1,INSD:ES158542.1,INSD:ES076354.1,
INSD:EH957658.1,INSD:EH983676.1,INSD:AI998382.1,
INSD:EH936021.1,INSD:DR212060.1,INSD:EH854082.1,
INSD:EH885938.1,INSD:EH876324.1,INSD:EH911452.1,
INSD:ES084815.1,INSD:EL198993.1,INSD:BP837783.1,
INSD:EL031278.1,INSD:DR212059.1,INSD:EL994797.1,
INSD:AV532067.1,INSD:DR212040.1,INSD:ES175339.1,
INSD:DR212037.1,INSD:DR212077.1,INSD:EL008937.1,
INSD:EL166640.1,INSD:EG455816.1,INSD:DR212047.1,
INSD:DR370846.1,INSD:DR212056.1,INSD:DR212078.1,
INSD:ES195798.1,INSD:DR212054.1,INSD:ES109799.1,
INSD:DR212067.1,INSD:EH829307.1,INSD:EG484829.1,
INSD:EH893518.1,INSD:ES178926.1,INSD:DR212076.1,
INSD:ES183154.1,INSD:ES204336.1,INSD:DR212061.1,
INSD:EH890912.1,INSD:DR212052.1,INSD:EL115984.1,
INSD:EH953744.1,INSD:ES152166.1,INSD:EH838686.1,
INSD:EH916680.1,INSD:ES132169.1,INSD:BP844809.1,
INSD:DR212051.1,INSD:EH946776.1,INSD:EL173841.1,
INSD:EL045630.1,INSD:DR212079.1,INSD:DR212044.1,
INSD:EG455817.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821085.1,INSD:AY088307.1"
/note="Ribosomal L38e protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation, ribosome biogenesis; LOCATED IN: cytosolic
ribosome, ribosome, cytosolic large ribosomal subunit;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L38e (InterPro:IPR002675); BEST Arabidopsis
thaliana protein match is: Ribosomal L38e protein family
(TAIR:AT3G59540.1); Has 621 Blast hits to 621 proteins in
253 species: Archae - 3; Bacteria - 0; Metazoa - 265;
Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes -
106 (source: NCBI BLink)."
/db_xref="Araport:AT2G43460"
/db_xref="TAIR:AT2G43460"
intron_pos 2:0 (1/2)
intron_pos 63:1 (2/2)
BEGIN
1 MPKQIHEIKD FLLTARRKDA RSVKIKRSKD IVKFKVRCSR YLYTLCVFDQ EKADKLKQSL
61 PPGLSVQDL
//