LOCUS AEC10270.1 405 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box and associated interaction
domains-containing protein protein.
ACCESSION CP002685-6673
PROTEIN_ID AEC10270.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43445"
/inference="Similar to RNA sequence,
EST:INSD:AU226896.1,INSD:DR366705.1,INSD:DR366708.1,
INSD:EG448138.1,INSD:EG448137.1,INSD:EG447945.1,
INSD:EG447939.1,INSD:EG447943.1,INSD:BP852327.1,
INSD:DR366709.1,INSD:EG447938.1,INSD:EG447935.1,
INSD:EG447950.1,INSD:EG447947.1,INSD:DR366706.1,
INSD:DR383824.1,INSD:EG447944.1,INSD:AU236090.1,
INSD:EG447946.1,INSD:EG447949.1,INSD:BP581794.1,
INSD:DR366707.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK221336.1,INSD:AK228196.1,INSD:AY500329.1"
/note="F-box and associated interaction domains-containing
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
F-box domain, cyclin-like (InterPro:IPR001810), F-box
domain, Skp2-like (InterPro:IPR022364), F-box associated
domain, type 1 (InterPro:IPR006527), F-box associated
interaction domain (InterPro:IPR017451); BEST Arabidopsis
thaliana protein match is: F-box and associated
interaction domains-containing protein (TAIR:AT2G43440.1);
Has 1172 Blast hits to 1159 proteins in 33 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1170;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="Araport:AT2G43445"
/db_xref="TAIR:AT2G43445"
intron_pos 135:1 (1/1)
BEGIN
1 MEEERENTNS IYIVSELLEE IFLGLPLKSI LKFKTVSKQW RSILESNLFV ERRRTLQKNH
61 PKILAAYNCD YCTRPGILPK SQFEGDEEIV YLHTDATQPS MTCDGLVCIT EPGWFNVLNV
121 STGQLRRFLP GPDPGPQANW LLGFGRDKVT GKYKIVRMCF HDCYEFGILD IESGEWSKLM
181 SPPHIMRVGS KSVCVNGSIY WLQISVSYII LALDLHQETF NGVYHLPATW VTQDTQLVNL
241 EDRLAMAMTT KVGPEWILEI WSMDIEEKGW SKRYTWSKAY SISLAHRVVV SWPWQKRWFT
301 PVSVSKQGNL VFYDNHKRLF KYYSGTDEIR CLSSNINVIS SYVENLAPLP LKPSHTHHDL
361 GNSNSKFSTS RCHLFPTRGS WISKVFRRNV LFTSLVVVGY IYLPL
//