LOCUS AEC10269.1 401 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box and associated interaction
domains-containing protein protein.
ACCESSION CP002685-6672
PROTEIN_ID AEC10269.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G43440"
/gene_synonym="T1O24.18"
/inference="Similar to RNA sequence,
EST:INSD:EG418251.1,INSD:EG424073.1,INSD:EG424077.1,
INSD:EG418250.1,INSD:EG447934.1,INSD:EG426711.1,
INSD:EG447937.1,INSD:EG424068.1,INSD:EL275642.1,
INSD:EG424072.1,INSD:EG424070.1,INSD:EG424074.1,
INSD:EG424069.1,INSD:EG418254.1,INSD:EG424076.1,
INSD:EG447933.1,INSD:EG426687.1,INSD:EG424079.1,
INSD:EG426710.1,INSD:EG447936.1,INSD:EG418255.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819691.1,INSD:AY500328.1"
/note="F-box and associated interaction domains-containing
protein; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box and associated interaction
domains-containing protein (TAIR:AT2G43445.1); Has 1369
Blast hits to 1361 proteins in 40 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1367;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="Araport:AT2G43440"
/db_xref="TAIR:AT2G43440"
intron_pos 137:1 (1/1)
BEGIN
1 MEEKRENTNS IYIVPELLED IFLRLPLKSI LKFKTVSRQW RSILESKLFV ERRGNLQKHH
61 RKILAAYNCN YFMRPSIFPE SRFEGDEEIV YLHCDAAQPS MTCDGLLCIT EPGWFNVLNP
121 SAGQLRRFPP GPGPVKGPQE NWLLGFGRDN VTGRYKIVRM CFHDCYEFGI LDIETGVWSK
181 LRSPPHNMLP GSKSVCVNGS IYWLQISAGY IILAMDLHEE SYHGVHHLPA TWVTQETQLV
241 NLEDRLAMAM TTNVGPEWIL EIWSMDIEGK GWSKGYSWSK SYSISLAHGV GFSWPWQKRW
301 FTPVWVSKQG NLLFYDNHKR LFKYYSGTDE IRCLSSNICV ISSYVENLAP LPLKPSHTHH
361 DLGNSNSKFS TSRCHLFPTR GSWISKVLFT SILFGYICLP L
//