LOCUS AEC10212.1 214 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002685-6605
PROTEIN_ID AEC10212.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ARA4"
/locus_tag="AT2G43130"
/gene_synonym="ARA-4"
/gene_synonym="ARABIDOPSIS RAB GTPASE HOMOLOG A5C"
/gene_synonym="ATRAB11F"
/gene_synonym="ATRABA5C"
/gene_synonym="F14B2.7"
/gene_synonym="RABA5C"
/inference="Similar to RNA sequence,
EST:INSD:ES148833.1,INSD:BP670150.1,INSD:DR267975.1,
INSD:BP818349.1,INSD:ES205362.1,INSD:ES135304.1,
INSD:EH959615.1,INSD:EL014918.1,INSD:AV564090.1,
INSD:EH910317.1,INSD:DR376414.1,INSD:EG480655.1,
INSD:DR267976.1,INSD:AV521171.1,INSD:DR267978.1,
INSD:AV527853.1,INSD:ES168075.1,INSD:EL083668.1,
INSD:EH827346.1,INSD:BX840688.1,INSD:DR267977.1,
INSD:EL002408.1,INSD:AU229374.1,INSD:BP668123.1,
INSD:EH940512.1,INSD:EG480656.1,INSD:BE529323.1,
INSD:EH923145.1,INSD:ES045043.1,INSD:BP854047.1,
INSD:ES207268.1,INSD:EH827027.1"
/inference="similar to RNA sequence,
mRNA:INSD:D01026.1,INSD:BX822019.1,INSD:BX821900.1,
INSD:BT025784.1"
/note="ARA4; FUNCTIONS IN: GTP binding, GTPase activity;
INVOLVED IN: response to heat, inter-Golgi cisterna
vesicle-mediated transport; LOCATED IN: trans-Golgi
network, Golgi stack, plasma membrane, Golgi-associated
vesicle; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran
GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753),
Rab11-related (InterPro:IPR015595), Ras small GTPase, Ras
type (InterPro:IPR003577), Small GTPase, Rho type
(InterPro:IPR003578), Ras GTPase (InterPro:IPR001806),
Small GTP-binding protein (InterPro:IPR005225), Ras small
GTPase, Rab type (InterPro:IPR003579), Small GTPase
(InterPro:IPR020851); BEST Arabidopsis thaliana protein
match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has
26465 Blast hits to 26427 proteins in 733 species: Archae
- 21; Bacteria - 130; Metazoa - 13921; Fungi - 3601;
Plants - 3013; Viruses - 20; Other Eukaryotes - 5759
(source: NCBI BLink)."
/db_xref="Araport:AT2G43130"
/db_xref="TAIR:AT2G43130"
intron_pos 112:1 (1/1)
BEGIN
1 MSDDDERGEE YLFKIVIIGD SAVGKSNLLT RYARNEFNPN SKATIGVEFQ TQSMLIDGKE
61 VKAQIWDTAG QERFRAVTSA YYRGAVGALV VYDITRSSTF ENVGRWLDEL NTHSDTTVAK
121 MLIGNKCDLE SIRAVSVEEG KSLAESEGLF FMETSALDST NVKTAFEMVI REIYSNISRK
181 QLNSDSYKEE LTVNRVSLVK NENEGTKTFS CCSR
//