LOCUS AEC10202.1 704 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tetratricopeptide repeat (TPR)-containing
protein protein.
ACCESSION CP002685-6589
PROTEIN_ID AEC10202.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NPG1"
/locus_tag="AT2G43040"
/gene_synonym="MFL8.10"
/gene_synonym="MFL8_10"
/gene_synonym="no pollen germination 1"
/inference="Similar to RNA sequence,
EST:INSD:AV809094.1,INSD:ES193667.1,INSD:ES097229.1,
INSD:ES189320.1,INSD:BE524912.1,INSD:BX836247.1,
INSD:BP586964.1,INSD:ES047521.1,INSD:ES051763.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT046199.1,INSD:AF474176.1"
/note="no pollen germination 1 (NPG1); CONTAINS InterPro
DOMAIN/s: Tetratricopeptide-like helical
(InterPro:IPR011990), Tetratricopeptide repeat-containing
(InterPro:IPR013026), Tetratricopeptide repeat
(InterPro:IPR019734); BEST Arabidopsis thaliana protein
match is: no pollen germination related 2
(TAIR:AT4G28600.1); Has 573 Blast hits to 561 proteins in
155 species: Archae - 29; Bacteria - 89; Metazoa - 223;
Fungi - 37; Plants - 141; Viruses - 0; Other Eukaryotes -
54 (source: NCBI BLink)."
/db_xref="Araport:AT2G43040"
/db_xref="TAIR:AT2G43040"
intron_pos 59:0 (1/4)
intron_pos 143:1 (2/4)
intron_pos 547:0 (3/4)
intron_pos 596:1 (4/4)
BEGIN
1 MLGNQSADFS EKGEDEIVRQ LCANGICMKT TEVEAKLDEG NIQEAESSLR EGLSLNFEEA
61 RALLGRLEYQ RGNLEGALRV FEGIDLQAAI QRLQVSVPLE KPATKKNRPR EPQQSVSQHA
121 ANLVLEAIYL KAKSLQKLGR ITEAAHECKS VLDSVEKIFQ QGIPDAQVDN KLQETVSHAV
181 ELLPALWKES GDYQEAISAY RRALLSQWNL DNDCCARIQK DFAVFLLHSG VEASPPSLGS
241 QIEGSYIPRN NIEEAILLLM ILLKKFNLGK AKWDPSVFEH LTFALSLCSQ TAVLAKQLEE
301 VMPGVFSRIE RWNTLALSYS AAGQNSAAVN LLRKSLHKHE QPDDLVALLL AAKLCSEEPS
361 LAAEGTGYAQ RAINNAQGMD EHLKGVGLRM LGLCLGKQAK VPTSDFERSR LQSESLKALD
421 GAIAFEHNNP DLIFELGVQY AEQRNLKAAS RYAKEFIDAT GGSVLKGWRF LALVLSAQQR
481 FSEAEVVTDA ALDETAKWDQ GPLLRLKAKL KISQSNPTEA VETYRYLLAL VQAQRKSFGP
541 LRTLSQMEED KVNEFEVWHG LAYLYSSLSH WNDVEVCLKK AGELKQYSAS MLHTEGRMWE
601 GRKEFKPALA AFLDGLLLDG SSVPCKVAVG ALLSERGKDH QPTLPVARSL LSDALRIDPT
661 NRKAWYYLGM VHKSDGRIAD ATDCFQAASM LEESDPIESF STIL
//